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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA1776 [new locus tag: SA_RS10210 ]
- pan locus tag?: SAUPAN005064000
- symbol: SA1776
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA1776 [new locus tag: SA_RS10210 ]
- symbol: SA1776
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 2028465..2029652
- length: 1188
- essential: no DEG
⊟Accession numbers[edit | edit source]
- Gene ID: 1124665 NCBI
- RefSeq: NP_375074 NCBI
- BioCyc:
- MicrobesOnline: 104100 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1141ATGAGTATTCTAGAAAAGATATTTAAAACTAGGAAAGATATAACATATATGCTTGATTTA
GATATGATAGAAGATCTATCACAACAAGCGTATGTGAAACGTTTAGCGATTGATAGTTGT
ATTGAATTTGTTGCGCGAGCTGTCGCTCAAAGTCATTTTAAAGTATTGGAAGGTAATAGA
ATTCAAAAGAATGATGTTTACTACAAGTTAAATATAAAACCAAATACTGACTTATCAAGC
GATAGTTTTTGGCAACAAGTTATATATAAACTAATTTATGATAACGAGGTTTTAATCGTA
GTAAGTGACAGCAAAGAATTACTTATCGCAGATAGCTTTTACAGAGAAGAGTACGCTTTG
TATGATGATATATTCAAAGATGTAACGGTTAAAGATTATACTTATCAACGTACTTTCACA
ATGCAAGAGGTCATATATTTAAAGTACAACAACAATAAAGTGACACACTTTGTAGAAAGT
CTATTCGAAGATTACGGGAAAATATTCGGAAGAATGATAGGTGCACAATTAAAAAACTAT
CAAATAAGAGGGATTTTGAAATCTGCCTCTAGCGCATATGACGAAAAGAATATAGAAAAA
TTACAAGCGTTCACAAATAAATTATTCAATACTTTTAATAAAAATCAACTAGCAATCGCG
CCTTTGATAGAAGGTTTTGATTATGAGGAATTATCTAATGGTGGTAAGAATAGTAACATG
CCTTTTTCTGAATTGAGTGAGCTAATGAGAGATGCAATAAAAAATGTTGCGTTGATGATT
GGTATACCTCCAGGTTTGATTTACGGAGAAACAGCTGATTTGGAAAAAAACACGCTTGTA
TTTGAGAAGTTCTGTTTAACACCTTTATTAAAAAAGATTCAGAACGAATTAAACGCGAAA
CTCATAACACAAAGCATGTATTTGAAAGATACAAGAATAGAAATTGTCGGTGTGAATAAA
AAAGACCCACTTCAATATGCTGAAGCAATTGACAAACTTGTAAGTTCTGGTTCATTTACA
AGGAATGAGGTGCGGATTATGTTAGGTGAAGAACCATCAGACAATCCTGAATTAGACGAA
TACCTGATTACTAAAAACTACGAAAAAGCTAACAGTGGTGAAAATGATGAAAAAGAAAAA
GATGAAAACACTTTGAAAGGTGGTGATGAAGATGAAAGCGGAGATTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA1776 [new locus tag: SA_RS10210 ]
- symbol: SA1776
- description: hypothetical protein
- length: 395
- theoretical pI: 4.54973
- theoretical MW: 45519.4
- GRAVY: -0.45443
⊟Function[edit | edit source]
- TIGRFAM: Mobile and extrachromosomal element functions Prophage functions phage portal protein, HK97 family (TIGR01537; HMM-score: 313.5)
- TheSEED :
- Phage portal protein
- PFAM: no clan defined Phage_portal; Phage portal protein (PF04860; HMM-score: 137.7)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP: Intracellular
- Prediction by SwissProt Classification: Cytoplasmic
- Pathway Prediction: No pathway
- Intracellular possibility: 1
- Signal peptide possibility: -1
- N-terminally Anchored Score: 1
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.002221
- TAT(Tat/SPI): 0.000263
- LIPO(Sec/SPII): 0.000222
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MSILEKIFKTRKDITYMLDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNRIQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSKELLIADSFYREEYALYDDIFKDVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMIGAQLKNYQIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIYGETADLEKNTLVFEKFCLTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDEYLITKNYEKANSGENDEKEKDENTLKGGDEDESGD
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: SA1768 < SA1769 < SA1770 < SA1771 < SA1772 < SA1773 < SA1774 < SA1775 < SA1776 < SA1777 < SA1778
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.
⊟Literature[edit | edit source]
⊟References[edit | edit source]
⊟Relevant publications[edit | edit source]