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NCBI: 26-AUG-2013

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA2082 [new locus tag: SA_RS11965 ]
  • pan locus tag?: SAUPAN005753000
  • symbol: ureA
  • pan gene symbol?: ureA
  • synonym:
  • product: urease subunit gamma

⊟Additional information (user-provided)[edit | edit source]

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA2082 [new locus tag: SA_RS11965 ]
  • symbol: ureA
  • product: urease subunit gamma
  • replicon: chromosome
  • strand: +
  • coordinates: 2342860..2343162
  • length: 303
  • essential: yes DEG other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    TTGCATTTTACACAACGAGAGCAAGACAAATTAATGATTGTAGTGGCGGCGGAAGTTGCA
    CGTCGTCGTAAAGCACGTGGTTTGAAACTAAATCATCCTGAGGCATTAGCTTTAATCAGC
    GATGAATTATTAGAAGGTGCACGCGATGGTAAGACCGTTGCAGAGTTAATGAGTTATGGT
    AGACAAATTCTAAACAAAGAAGATGTCATGGATGGTGTCGAACACATGATTACAGATATC
    GAAATCGAGGCTACGTTCCCCGATGGTACTAAGTTAATCACAGTACATCACCCTATTGTT
    TAA
    60
    120
    180
    240
    300
    303


⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA2082 [new locus tag: SA_RS11965 ]
  • symbol: UreA
  • description: urease subunit gamma
  • length: 100
  • theoretical pI: 5.99184
  • theoretical MW: 11273
  • GRAVY: -0.233

⊟Function[edit | edit source]

  • reaction:
    EC 3.5.1.5?  ExPASy
    Urease Urea + H2O = CO2 + 2 NH3
  • TIGRFAM:
    Metabolism Central intermediary metabolism Nitrogen metabolism urease, gamma subunit (TIGR00193; EC 3.5.1.5; HMM-score: 155)
  • TheSEED  :
    • Urease gamma subunit (EC 3.5.1.5)
    Amino Acids and Derivatives Arginine; urea cycle, polyamines Urea decomposition  Urease gamma subunit (EC 3.5.1.5)
    and 1 more
    Amino Acids and Derivatives Arginine; urea cycle, polyamines Urease subunits  Urease gamma subunit (EC 3.5.1.5)
  • PFAM:
    no clan defined Urease_gamma; Urease, gamma subunit (PF00547; HMM-score: 157.8)
    and 1 more
    PilP (CL0655) CdsD_C; CdsD C-terminal (PF23862; HMM-score: 12.6)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 9.97
    • Cytoplasmic Membrane Score: 0
    • Cellwall Score: 0.01
    • Extracellular Score: 0.02
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.9912
    • Cytoplasmic Membrane Score: 0.0016
    • Cell wall & surface Score: 0
    • Extracellular Score: 0.0071
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular possibility: 1
    • Signal peptide possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.00565
    • TAT(Tat/SPI): 0.001991
    • LIPO(Sec/SPII): 0.001087
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MHFTQREQDKLMIVVAAEVARRRKARGLKLNHPEALALISDELLEGARDGKTVAELMSYGRQILNKEDVMDGVEHMITDIEIEATFPDGTKLITVHHPIV

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell: data available for COL
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Additional information (user-provided)[edit | edit source]

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟Other information (user-provided)[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]


⊟Relevant publications[edit | edit source]

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