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NCBI: 10-JUN-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL1423 [new locus tag: SACOL_RS07245 ]
- pan locus tag?: SAUPAN003796000
- symbol: SACOL1423
- pan gene symbol?: pstC
- synonym:
- product: phosphate ABC transporter permease
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SACOL1423 [new locus tag: SACOL_RS07245 ]
- symbol: SACOL1423
- product: phosphate ABC transporter permease
- replicon: chromosome
- strand: -
- coordinates: 1434019..1434945
- length: 927
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 3236372 NCBI
- RefSeq: YP_186275 NCBI
- BioCyc: see SACOL_RS07245
- MicrobesOnline: 912881 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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901ATGACTTCATCTACTAATGTTAAAGCTTTAATCGAAAAAAATAATAATAAAAAAGGAAAG
CATAATGACAAAATTATACCAGTTATTTTAGCCGCAATTTCAGCGATTTCCATTTTAACA
ACACTAGGTATATTAATCACATTGCTTTTAGAAACCATCACTTTTTTCACCAGAATTCCA
ATAACTGAATTTCTATTTTCTACTACTTGGAATCCTACCGGTTCAGACCCTAAGTTTGGT
ATCTGGGCATTGATAATAGGGACTTTAAAAATCACAGTTATTGCGACTATATTTGCAGTT
CCAGTCGGGCTTGGTGCAGCAATTTATTTAAGTGAATATGCAAGTGACCGTGCACGACGC
ATAATTAAACCGATATTAGAAATTTTAGCAGGAATACCAACAATTGTGTTTGGTTTCTTT
GCATTAACCTTTGTTACACCAGTATTAAGATCTTTCATACCAGGTCTTGGAGAGTTTAAT
GCTATAAGTCCCGGCTTAGTTGTCGGTATTATGATTGTCCCTCTCATCACAAGTTTGAGT
GAGGATGCAATGGCATCTGTACCAAATAAAATTCGAGAAGGTGCCTATGGACTTGGAGCA
ACTAAATTAGAAGTAGCAACTAAAGTCGTACTTCCCGCAGCAACATCAGGTATTGTAGCT
TCAATCGTTCTCGCGATTTCAAGAGCAATTGGAGAAACGATGATTGTATCATTAGCGGCA
GGTAGTTCGCCAACAGCTTCATTAAGTTTAACAAGTTCGATTCAAACAATGACTGGATAT
ATTGTTGAGATAGCGACAGGTGATGCAACATTTGGATCAAATATTTATTACAGTATTTAT
GCTGTAGGGTTCACACTATTTATCTTTACCTTAATCATGAATTTACTTTCTCAGTGGATT
TCTAAGCGTTTTAGGGAGGAGTATTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL1423 [new locus tag: SACOL_RS07245 ]
- symbol: SACOL1423
- description: phosphate ABC transporter permease
- length: 308
- theoretical pI: 9.67025
- theoretical MW: 32903.6
- GRAVY: 0.744156
⊟Function[edit | edit source]
- TIGRFAM: Transport and binding proteins Anions phosphate ABC transporter, permease protein PstC (TIGR02138; HMM-score: 265.7)and 9 moreTransport and binding proteins Anions phosphate ABC transporter, permease protein PstA (TIGR00974; HMM-score: 177.6)Transport and binding proteins Anions molybdate ABC transporter, permease protein (TIGR02141; HMM-score: 53.5)NifC-like ABC-type porter (TIGR01581; HMM-score: 49.4)choline ABC transporter, permease protein (TIGR03416; HMM-score: 35)Transport and binding proteins Anions sulfate ABC transporter, permease protein CysT (TIGR02139; HMM-score: 32.6)Transport and binding proteins Anions sulfate ABC transporter, permease protein (TIGR00969; HMM-score: 30.3)2-aminoethylphosphonate ABC transport system, membrane component PhnV (TIGR03255; HMM-score: 20.8)2-aminoethylphosphonate ABC transporter, permease protein (TIGR03226; HMM-score: 20.5)Transport and binding proteins Anions sulfate ABC transporter, permease protein CysW (TIGR02140; HMM-score: 16.3)
- TheSEED :
- Phosphate ABC transporter, permease protein PstC
Phosphorus Metabolism Phosphorus Metabolism - no subcategory High affinity phosphate transporter and control of PHO regulon Phosphate transport system permease protein PstC (TC 3.A.1.7.1)and 1 more - PFAM: BPD_transp_1 (CL0404) BPD_transp_1; Binding-protein-dependent transport system inner membrane component (PF00528; HMM-score: 75)and 1 moreno clan defined DUF4605; Domain of unknown function (DUF4605) (PF15378; HMM-score: 7.8)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 6
- LocateP: Multi-transmembrane
- Prediction by SwissProt Classification: Membrane
- Pathway Prediction: Sec-(SPI)
- Intracellular possibility: 0.17
- Signal peptide possibility: -1
- N-terminally Anchored Score: -1
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.001337
- TAT(Tat/SPI): 0.000097
- LIPO(Sec/SPII): 0.001187
- predicted transmembrane helices (TMHMM): 6
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MTSSTNVKALIEKNNNKKGKHNDKIIPVILAAISAISILTTLGILITLLLETITFFTRIPITEFLFSTTWNPTGSDPKFGIWALIIGTLKITVIATIFAVPVGLGAAIYLSEYASDRARRIIKPILEILAGIPTIVFGFFALTFVTPVLRSFIPGLGEFNAISPGLVVGIMIVPLITSLSEDAMASVPNKIREGAYGLGATKLEVATKVVLPAATSGIVASIVLAISRAIGETMIVSLAAGSSPTASLSLTSSIQTMTGYIVEIATGDATFGSNIYYSIYAVGFTLFIFTLIMNLLSQWISKRFREEY
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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