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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL_RS11255 [old locus tag: SACOL2150 ]
- pan locus tag?: SAUPAN005501000
- symbol: SACOL_RS11255
- pan gene symbol?: fmtB
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SACOL_RS11255 [old locus tag: SACOL2150 ]
- symbol: SACOL_RS11255
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 2214389..2221825
- length: 7437
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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3181
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7141
7201
7261
7321
7381ATGAATTTATTCAGACAACAAAAATTTAGTATCAGAAAATTTAATGTCGGTATTTTTTCA
GCTTTAATTGCCACTGTTACTTTTATATCTACTAACCCGACAACAGCGTCTGCAGCAGAG
CAAAATCAGCCTGCACAAAATCAACCAGCACAACCAGCTGATGCCAATACACAGCCTAAC
GCAAATGCTGGTGCTCAAGCTAATCCTACAGCACAGCCAGCTGCACCTGCCAACCAAGGA
CAACCAGCAGTACAACCAGCAAACCAAGGTGGACAGGCTAATCCAGCAGGAGGAGCAGCA
CAACCAAATACACAACCAGCTGGACAAGGTAATCAAGCTGATCCGAATAACGCTGCACAA
GCACAACCTGGAAATCAAGCAACACCGGCAAACCAAGCAGGTCAAGGAAATAACCAAGCA
ACACCTAATAATAATGCAACACCGGCAAATCAAACACAGCCAGCGAATGCTCCAGCAGCA
GCGCAACCAGCAGCACCTGTAGCAGCAAACGCACAAACTCAAGATCCAAATGCTAGCAAT
ACTGGTGAAGGCAGTATTAATACGACATTAACATTTGATGATCCTGCCATATCAACAGAT
GAGAATAGACAGGATCCAACTGTAACTGTTACAGATAAAGTAAATGGTTATTCATTAATT
AACAACGGTAAGATTGGTTTCGTTAACTCAGAATTAAGACGAAGCGATATGTTTGATAAG
AATAACCCTCAAAACTATCAAGCTAAAGGAAACGTGGCTGCATTAGGTCGTGTGAATGCA
AATGATTCTACAGATCATGGTAACTTTAACGGTATTTCAAAAACTGTAAATGTAAAACCA
GATTCAGAATTAATTATTAACTTTACTACTATGCAAACGAATAGTAAGCAAGGTGCAACA
AATTTAGTTATTAAAGATGCTAAGAAAAATACTGAATTAGCAACTGTAAATGTTGCTAAG
ACTGGTACTGCACATTTATTTAAAGTACCAACTGATGCTGATCGTTTAGATTTACAATTT
ATTCCTGACAATACAGCAGTTGCTGATGCTTCAAGAATTACAACAAATAAAGATGGTTAT
AAATACTATTCATTCATTGATAATGTAGGTCTATTCTCAGGATCACATTTATATGTCAAA
AATAGAGATTTAGCACCGAAAGCAACTAACAATAAAGAATATACTATTAATACTGAAATC
GGTAACAATGGTAATTTTGGTGCTTCATTAAAAGCAGATCAATTTAAATATGAAGTAACA
TTACCACAAGGTGTAACTTACGTTAATAATTCATTAACTACAACATTCCCTAATGGTAAT
GAAGACAGTACAGTATTGAAAAATATGACTGTTAATTATGATCAAAATGCAAATAAAGTT
ACATTTACAAGCCAAGGTGTGACAACGGCACGTGGTACACACACTAAAGAAGTTTTATTC
CCAGATAAATCTTTAAAATTATCATATAAAGTTAATGTTGCGAATATCGATACACCTAAA
AATATTGATTTTAATGAAAAATTAACATATCGTACTGCTTCAGATGTTGTAATTAATAAT
GCGCAACCAGAAGTTACACTAACTGCAGATCCATTTTCAGTAGCGGTTGAAATGAACAAA
GATGCGTTGCAACAACAAGTAAACTCACAAGTTGATAATAGTCATTACACAACAGCATCA
ATTGCAGAATACAATAAACTTAAACAACAAGCAGATACTATTTTAAATGAAGATGCGAAT
CATGTTAAAACTGCAAATCGTGCATCTCAAGCGGATATTGATGGTTTAGTAACTAAATTA
CAAGCTGCATTAATTGATAATCAAGCAGCAATTGCTGAATTAGATACTAAAGCTCAAGAA
AAGGTTACAGCAGCACAACAAAGTAAAAAAGTTACGCAAGATGAAGTTGCAGCACTTGTA
ACTAAAATTAACAATGATAAAAATAATGCAATCGCAGAAATTAATAAACAAACTACAGCA
CAAGGTGTCACAACTGAAAAAGATAATGGTATCGCAGTGTTAGAACAAGATGTGATTACA
CCAACAGTTAAACCTCAAGCGAAACAAGATATTATCCAAGCAGTTACAACTCGTAAACAA
CAAATTAAAAAGTCAAATGCATCATTACAAGATGAAAAAGATGTAGCAAATGATAAAATT
GGTAAAATTGAAACAAAGGCAATTAAAGATATTGATGCAGCAACAACAAATGCACAAGTA
GAAGCCATTAAAACAAAAGCAATCAATGATATTAATCAAACTACACCTGCTACAACAGCT
AAAGCAGCAGCTCTTGAAGAATTTGACGAAGTTGTTCAAGCACAAATTGATCAAGCACCT
TTAAATCCTGATACAACAAATGAAGAAGTAGCGGAAGCTATTGAACGTATTAATGCAGCT
AAAGTTTCTGGTGTTAAAGCAATTGAAGCGACAACGACTGCACAAGATTTAGAAAGAGTT
AAAAACGAAGAAATCTCAAAAATTGAAAATATTACTGACTCTACGCAAACAAAAATGGAT
GCCTATAATGAAGTTAAACAAGCTGCAACAGCTAGAAAAGCTCAAAATGCTACAGTTTCA
AATGCAACAAATGAAGAAGTAGCAGAAGCTGATGCAGCAGTAGATGCAGCTCAAAAGCAA
GGTTTACATGACATCCAAGTTGTTAAATCAAAACAGGAAGTTGCTGATACAAAATCAAAA
GTATTAGATAAAATCAATGCAATTCAAACACAAGCAAAAGTTAAACCTGCAGCTGATACG
GAAGTAGAAAACGCATATAATACACGTAAACAAGAAATTCAAAATAGCAATGCTTCAACT
ACAGAAGAAAAACAAGCTGCATATACAGAATTAGATACTAAAAAGCAAGAAGCAAGAACA
AATCTTGATGCTGCAAATACAAACAGTGATGTAACAACAGCTAAAGACAATAGTATTGCT
GCAATTAATCAAGTTCAAGCTGCCACAACTAAGAAATCGGATGCAAAAGCGGAAATCGCT
CAAAAAGCAAGTGAACGTAAAACAGCAATTGAAGCAATGAATGATTCGACTACTGAAGAA
CAACAAGCAGCGAAAGACAAAGTGGATCAAGCAGTAGTTACTGCAAACGCTGATATAGAT
AATGCTGCAGCAAACAATGATGTGGATAATGCAAAAACTACAAATGAAGCTACAATCGCA
GCCATTACACCTGATGCAAATGTTAAACCAGCAGCAAAACAAGCAATTGCAGATAAAGTA
CAAGCTCAAGAAACAGCAATTGATGGAAATAACGGCTCAACAACTGAAGAAAAAGCAGCT
GCTAAACAACAAGTTCAAACTGAAAAAACAACAGCTGATGCCGCAATAGATGCAGCACAT
ACAAATGCGGAAGTTGAAGCGGCTAAAAAAGCAGCAATTGCTAAAATTGAAGCGATTCAG
CCAGCAACAACAACTAAAGATAATGCGAAAGAAGCAATTGCTACGAAAGCGAATGAACGT
AAAACAGCAATCGCTCAAACGCAAGACATTACTGCTGAAGAAATTGCAGCGGCTAATGCG
GACGTAGATAATGCTGTGACACAAGCAAATAGCAACATTGAAGCTGCTAATAGTCAAAAT
GATGTAGACCAAGCGAAAACGACAGGTGAAAATAGTATTGATCAAGTAACACCAACAGTT
AATAAAAAAGCAACTGCACGTAATGAAATCACAGCAATTTTAAATAACAAATTGCAAGAG
ATTCAAGCTACGCCAGATGCAACAGATGAAGAAAAACAAGCAGCTGATGCTGAAGCAAAT
ACTGAAAATGGTAAAGCAAATCAAGCCATTTCAGCAGCAACTACTAACGCACAAGTTGAT
GAAGCTAAAGCAAATGCAGAAGCAGCGATTAATGCGGTAACACCAAAAGTTGTGAAGAAA
CAAGCGGCTAAAGATGAAATTGATCAATTACAAGCAACGCAAACAAATGTTATCAATAAT
GATCAGAACGCTACAACAGAAGAAAAAGAAGCAGCTATTCAACAATTAGCAACAGCAGTT
ACAGACGCGAAAAATAATATTACAGCTGCAACTGATGATAATGGTGTAGATCAGGCGAAA
GACGCTGGAAAGAATTCAATTCAAAGCACGCAACCAGCAACAGCGGTTAAATCAAATGCT
AAAAATGATGTTGATCAAGCTGTGACAACTCAAAATCAAGCAATTGATAATACAACTGGT
GCTACAACTGAAGAGAAAAATGCAGCAAAAGATTTAGTTTTAAAAGCTAAAGAAAAAGCG
TATCAAGATATCTTAAATGCACAAACAACTAATGATGTTACGCAAATTAAAGATCAAGCA
GTTGCTGATATTCAAGGTATTACTGCAGATACAACAATTAAAGATGTTGCGAAAGATGAA
TTAGCAACAAAAGCAAACGAACAAAAAGCGCTTATTGCACAAACTGCAGATGCGACTACT
GAAGAAAAAGAACAAGCAAATCAACAAGTAGACGCACAATTAACACAAGGTAATCAAAAT
ATTGAAAATGCACAGTCAATCGATGATGTAAACACTGCAAAAGATAATGCAATTCAAGCA
ATTGACCCAATTCAAGCATCAACAGATGTTAAAACGAATGCAAGAGCGGAATTGCTAACT
GAAATGCAAAATAAAATAACTGAAATACTTAATAATAATGAGACTACTAATGAAGAAAAA
GGTAACGATATTGGACCAGTTAGAGCAGCATATGAAGAAGGTTTAAATAATATTAATGCA
GCAACTACTACAGGTGATGTAACTACTGCTAAAGATACAGCAGTACAAAAAGTTCAACAA
CTTCATGCAAATCCTGTTAAGAAACCAGCAGGTAAAAAAGAATTAGATCAAGCTGCAGCT
GATAAGAAAACACAAATAGAACAAACACCAAATGCATCACAACAAGAAATTAATGATGCA
AAACAAGAAGTTGATACTGAATTAAATCAAGCGAAAACAAATGTCGATCAATCATCAACA
AATGAATATGTTGATAATGCAGTTAAAGAAGGAAAAGCTAAAATTAATGCAGTTAAAACA
TTTAGTGAGTACAAAAAAGATGCTTTAGCTAAAATTGAAGATGCATATAATGCTAAAGTA
AACGAAGCGGATAACTCTAACGCATCGACTTCAAGTGAAATTGCTGAAGCGAAACAAAAA
CTTGCTGAATTAAAACAAACTGCGGATCAAAATGTTAATCAAGCTACTTCTAAAGATGAC
ATTGAAGTTCAAATTCATAATGACTTAGATAATATTAACGATTACACAATTCCAACAGGT
AAAAAAGAATCAGCTACAACAGATTTATATGCTTATGCAGATCAGAAGAAAAATAATATT
TCAGCTGACACTAATGCAACACAAGATGAAAAGCAACAAGCAATTAAGCAAGTTGACCAA
AATGTTCAAACTGCATTAGAAAGCATTAATAATGGTGTGGATAATGGTGACGTTGATGAT
GCATTAACACAAGGTAAAGCAGCAATTGATGCTATTCAAGTAGATGCTACTGTTAAACCT
AAAGCGAACCAAGCTATTGAAGTTAAAGCAGAAGATACGAAAGAATCTATTGATCAAAGT
GACCAGTTAACTGCTGAAGAAAAAACTGAAGCATTAGCAATGATTAAACAAATTACAGAT
CAAGCTAAACAAGGTATTACTGATGCAACAACAACTGCTGAAGTTGAAAAAGCGAAAGCT
CAAGGACTTGAAGCATTTGATAACATTCAAATCGACTCAACAGAAAAACAAAAAGCTATC
GAAGAATTAGAAACTGCACTAGACCAGATTGAAGCAGGTGTAAATGTCAACGCTGATGCT
ACAACTGAAGAAAAAGAAGCGTTTACGAATGCTTTAGAAGACATTTTATCAAAAGCAACT
GAAGATATTTCTGATCAAACTACAAATGCAGAAATCGCTACTGTCAAAAATAGTGCGCTT
GAACAACTTAAAGCACAACGTATTAATCCTGAAGTTAAGAAAAATGCTTTGGAAGCAATC
AGAGAAGTGGTTAACAAGCAAATAGAAATAATTAAAAATGCAGATGCAGATGCATCGGCG
AAAGAAATTGCACGTACGGATTTAGGTAGATATTTTGACAGATTTGCTGATAAATTAGAT
AAAACACAAACAAATGCAGAAGTTGCTGAATTACAAAATGTAACGATACCTGCAATTGAA
GCGATTGTGCCTCAGAATGATCCAGATGCTAATGATACTAATAATGGTATAGATAATAAT
GATGCAACAGCAAATTCAAATGCTAATGCAACACCAGAAAATACTGGACAACCTAACGTA
TCTGAGACGACAGCTAATGGCAAAGCAGACGCTTCTCCGACAACACCAAATAATAGTGAT
GCGGCAACAGGTGAAACAACAGCAACATCAGCAACTGATGATGCAAATGATAAACCGCAA
GCTAATAACAATTCTAGTGTAGATGCATCAACAAACAGTCCGACAATGGATAACGATGTA
ACTAGTAAACCAGAAGTAGAATCAACTAATAACGGCACAACTGATAAACCTGTAACAGAA
ACTGATAATGCAACGCCAGCAGAAAGCACAACAAATAACAATAGTACAACTACAGCAACA
AACGAGAATGCACCAACAGGATCAACAGCAACGGCTCCAACAACTGCGAGCACAGAAGCA
GCATCATCTGCTGATAGCAAAGATAATGCATCTGTAAATGATTCAAAACAAAATGCTGAA
GTAAATAATAGTGCTGAATCTCAATCAACTAATGACAAGGTTGCACAACCAAAATCTGAA
AATAAAGCTAAGGCAGAAAAAGATGGTAGTGATTCAACAAATCAAAGTATGGTTGAATCA
ACAACTGAAACATTGCCTTCAGCAGACATAACAGAACCAAATGTACCTTCTAATACATCA
AAAGATAAAGAAGAAAGTACGACAAATCAAACTGATGCAGGACAACTTAAGTCTGAAACT
AACGTTGCATCTAACGAAGCAGATAAATCGCCAAGCAAAGCTGATACTGAAGTTTCGAAT
AAACCATCAACATCTGCATCTTCTGAAGCAAAAGAAAAAATGACTTCAACTAATCTTAGC
CAAAAAGATGATACGGCAACAGCAGATACTAATGATACGCAAAAATCAGTTGGTTCAGCT
GCAAACAATAAAGCTACGCAAAACGACGGTGCCAATGCATCTCCAGCTACAGTTTCAAAT
GGAAGCAATAGTGCTAATCAAGATATGCTTAATGTAACTAACACTGACGACCACCAAGCT
AAGACAAAATCAGCTCAACAAGGAAAAGTTAATAAAGCTAAACAACAAGCTAAAACTTTA
CCAGATACTGGTATGTCACATAATGACGATTTACCATATGCTGAATTAGCTCTAGGTGCA
GGTATGGCATTCTTAATTAGAAGATTCACTAAGAAAGACCAACAAACTGAAGAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL_RS11255 [old locus tag: SACOL2150 ]
- symbol: SACOL_RS11255
- description: hypothetical protein
- length: 2478
- theoretical pI: 4.32389
- theoretical MW: 263029
- GRAVY: -0.818039
⊟Function[edit | edit source]
- TIGRFAM: SasC/Mrp/FmtB intercellular aggregation domain (TIGR04263; HMM-score: 400.7)and 2 moregram-positive signal peptide, YSIRK family (TIGR01168; HMM-score: 41.6)Cell envelope Other LPXTG cell wall anchor domain (TIGR01167; HMM-score: 14.9)
- TheSEED: see SACOL2150
- PFAM: B_GA (CL0598) DUF1542; Domain of Unknown Function (DUF1542) (PF07564; HMM-score: 804.8)and 1 moreno clan defined YSIRK_signal; YSIRK type signal peptide (PF04650; HMM-score: 33)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cellwall
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 0
- Cellwall Score: 10
- Extracellular Score: 0
- Internal Helices: 0
- LocateP:
- SignalP: Signal peptide SP(Sec/SPI) length 38 aa
- SP(Sec/SPI): 0.958021
- TAT(Tat/SPI): 0.037917
- LIPO(Sec/SPII): 0.001836
- Cleavage Site: CS pos: 38-39. ASA-AE. Pr: 0.9061
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MNLFRQQKFSIRKFNVGIFSALIATVTFISTNPTTASAAEQNQPAQNQPAQPADANTQPNANAGAQANPTAQPAAPANQGQPAVQPANQGGQANPAGGAAQPNTQPAGQGNQADPNNAAQAQPGNQATPANQAGQGNNQATPNNNATPANQTQPANAPAAAQPAAPVAANAQTQDPNASNTGEGSINTTLTFDDPAISTDENRQDPTVTVTDKVNGYSLINNGKIGFVNSELRRSDMFDKNNPQNYQAKGNVAALGRVNANDSTDHGNFNGISKTVNVKPDSELIINFTTMQTNSKQGATNLVIKDAKKNTELATVNVAKTGTAHLFKVPTDADRLDLQFIPDNTAVADASRITTNKDGYKYYSFIDNVGLFSGSHLYVKNRDLAPKATNNKEYTINTEIGNNGNFGASLKADQFKYEVTLPQGVTYVNNSLTTTFPNGNEDSTVLKNMTVNYDQNANKVTFTSQGVTTARGTHTKEVLFPDKSLKLSYKVNVANIDTPKNIDFNEKLTYRTASDVVINNAQPEVTLTADPFSVAVEMNKDALQQQVNSQVDNSHYTTASIAEYNKLKQQADTILNEDANHVKTANRASQADIDGLVTKLQAALIDNQAAIAELDTKAQEKVTAAQQSKKVTQDEVAALVTKINNDKNNAIAEINKQTTAQGVTTEKDNGIAVLEQDVITPTVKPQAKQDIIQAVTTRKQQIKKSNASLQDEKDVANDKIGKIETKAIKDIDAATTNAQVEAIKTKAINDINQTTPATTAKAAALEEFDEVVQAQIDQAPLNPDTTNEEVAEAIERINAAKVSGVKAIEATTTAQDLERVKNEEISKIENITDSTQTKMDAYNEVKQAATARKAQNATVSNATNEEVAEADAAVDAAQKQGLHDIQVVKSKQEVADTKSKVLDKINAIQTQAKVKPAADTEVENAYNTRKQEIQNSNASTTEEKQAAYTELDTKKQEARTNLDAANTNSDVTTAKDNSIAAINQVQAATTKKSDAKAEIAQKASERKTAIEAMNDSTTEEQQAAKDKVDQAVVTANADIDNAAANNDVDNAKTTNEATIAAITPDANVKPAAKQAIADKVQAQETAIDGNNGSTTEEKAAAKQQVQTEKTTADAAIDAAHTNAEVEAAKKAAIAKIEAIQPATTTKDNAKEAIATKANERKTAIAQTQDITAEEIAAANADVDNAVTQANSNIEAANSQNDVDQAKTTGENSIDQVTPTVNKKATARNEITAILNNKLQEIQATPDATDEEKQAADAEANTENGKANQAISAATTNAQVDEAKANAEAAINAVTPKVVKKQAAKDEIDQLQATQTNVINNDQNATTEEKEAAIQQLATAVTDAKNNITAATDDNGVDQAKDAGKNSIQSTQPATAVKSNAKNDVDQAVTTQNQAIDNTTGATTEEKNAAKDLVLKAKEKAYQDILNAQTTNDVTQIKDQAVADIQGITADTTIKDVAKDELATKANEQKALIAQTADATTEEKEQANQQVDAQLTQGNQNIENAQSIDDVNTAKDNAIQAIDPIQASTDVKTNARAELLTEMQNKITEILNNNETTNEEKGNDIGPVRAAYEEGLNNINAATTTGDVTTAKDTAVQKVQQLHANPVKKPAGKKELDQAAADKKTQIEQTPNASQQEINDAKQEVDTELNQAKTNVDQSSTNEYVDNAVKEGKAKINAVKTFSEYKKDALAKIEDAYNAKVNEADNSNASTSSEIAEAKQKLAELKQTADQNVNQATSKDDIEVQIHNDLDNINDYTIPTGKKESATTDLYAYADQKKNNISADTNATQDEKQQAIKQVDQNVQTALESINNGVDNGDVDDALTQGKAAIDAIQVDATVKPKANQAIEVKAEDTKESIDQSDQLTAEEKTEALAMIKQITDQAKQGITDATTTAEVEKAKAQGLEAFDNIQIDSTEKQKAIEELETALDQIEAGVNVNADATTEEKEAFTNALEDILSKATEDISDQTTNAEIATVKNSALEQLKAQRINPEVKKNALEAIREVVNKQIEIIKNADADASAKEIARTDLGRYFDRFADKLDKTQTNAEVAELQNVTIPAIEAIVPQNDPDANDTNNGIDNNDATANSNANATPENTGQPNVSETTANGKADASPTTPNNSDAATGETTATSATDDANDKPQANNNSSVDASTNSPTMDNDVTSKPEVESTNNGTTDKPVTETDNATPAESTTNNNSTTTATNENAPTGSTATAPTTASTEAASSADSKDNASVNDSKQNAEVNNSAESQSTNDKVAQPKSENKAKAEKDGSDSTNQSMVESTTETLPSADITEPNVPSNTSKDKEESTTNQTDAGQLKSETNVASNEADKSPSKADTEVSNKPSTSASSEAKEKMTSTNLSQKDDTATADTNDTQKSVGSAANNKATQNDGANASPATVSNGSNSANQDMLNVTNTDDHQAKTKSAQQGKVNKAKQQAKTLPDTGMSHNDDLPYAELALGAGMAFLIRRFTKKDQQTEE
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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