Jump to navigation
Jump to search
PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40
⊟Summary[edit | edit source]
- pan ID?: SAUPAN000587000
- symbol?: —
- synonym:
- description?: tandem lipoprotein
- tandem lipoprotein
- pseudogene
- staphylococcal tandem lipoprotein
- Tandem lipo protein within Pathogenicity island
- truncated staphylococcal tandem lipoprotein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 678827..688820
- synteny block?: BlockID0002880
- occurrence?: in 24% of 33 strains
⊟Orthologs[edit | edit source]
COL:
—
N315:
—
NCTC8325:
—
04-02981:
—
08BA02176:
—
11819-97:
MS7_0415
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
SAA6008_00440
JKD6159:
SAA6159_00392 (lpl3)
LGA251:
—
M013:
M013TW_0399
MRSA252:
—
MSHR1132:
—
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
—
T0131:
SAT0131_00476 (fhs)
TCH60:
—
TW20:
—
USA300_TCH1516:
USA300HOU_0440
VC40:
—
⊟Genome Viewer[edit | edit source]
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: