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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000905000
- symbol?: —
- synonym:
- description?: DUF1648 domain-containing protein
- strand?: +
- coordinates?: 1172220..1172729
- synteny block?: BlockID0004420
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0110
08BA02176:
C248_0096
11819-97:
MS7_0101
6850:
RSAU_000063
71193:
ST398NM01_0120
ECT-R 2:
ECTR2_65
ED133:
SAOV_0056
ED98:
SAAV_0076
HO 5096 0412:
SAEMRSA15_00750
JH1:
SaurJH1_0100
JH9:
SaurJH9_0096
JKD6008:
SAA6008_00087
JKD6159:
SAA6159_00092
LGA251:
SARLGA251_00840
M013:
M013TW_0098
MRSA252:
SAR0112
MSHR1132:
SAMSHR1132_00850
MSSA476:
SAS0083
Mu3:
SAHV_0108
Mu50:
SAV0109
MW2:
MW0082
RF122:
SAB0048
ST398:
SAPIG0120
T0131:
SAT0131_00091 (marR)
TCH60:
HMPREF0772_10388
TW20:
SATW20_01210
USA300_TCH1516:
USA300HOU_0120
VC40:
SAVC_00285
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSKIRSFTILSLLIYLAMMCYTVVTYPKLPTKVPIHYNLAGDADNFADKWVLLLINSAFI
N315 MSKIRSFTILSLLIYLAMMCYTVVTYSKLPTKVPIHYNLAGDADNFADKWVLLLINSAFI
NCTC8325 MSKIRSFTILSLLIYLAMMCYTVVTYPKLPTKVPIHYNLAGDADNFADKWVLLLINSAFI
Newman MSKIRSFTILSLLIYLAMMCYTVVTYPKLPTKVPIHYNLAGDADNFADKWVLLLINSAFI
USA300_FPR3757 MSKIRSFTILSLLIYLAMMCYTVVTYPKLPTKVPIHYNLAGDADNFADKWVLLLINSAFI
**************************.*********************************
COL VIWLIFFIAGRYYERFAKWSHYNHTPREIRAIKLFLSTLNLEIMSYMSIFTVLEIWQIQH
N315 VIWLIFFIAGRYYERFAKWSHYNHTPREIRAIKLFLSTLNLEIMSYMSIFTVLEIWQIQH
NCTC8325 VIWLIFFIAGRYYERFAKWSHYNHTPREIRAIKLFLSTLNLEIMSYMSIFTVLEIWQIQH
Newman VIWLIFFIAGRYYERFAKWSHYNHTPREIRAIKLFLSTLNLEIMSYMSIFTVLEIWQIQH
USA300_FPR3757 VIWLIFFIAGRYYERFAKWSHYNHTPREIRAIKLFLSTLNLEIMSYMSIFTVLEIWQIQH
************************************************************
COL HHQFNLLWFNMIFIIIIGLTLVIFCLLPTIHKMRDSQ
N315 HHQLNLLWFNMIFIIIIGLTLVIFCLLPTIHKMRDSQ
NCTC8325 HHQFNLLWFNMIFIIIIGLTLVIFCLLPTIHKMRDSQ
Newman HHQFNLLWFNMIFIIIIGLTLVIFCLLPTIHKMRDSQ
USA300_FPR3757 HHQFNLLWFNMIFIIIIGLTLVIFCLLPTIHKMRDSQ
***:*********************************