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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000935000
- symbol?: galE
- synonym:
- description?: NAD-dependent dehydratase
- NAD-dependent dehydratase
- NAD-dependent epimerase/dehydratase family protein
- NAD-dependent epimerase/dehydratase
- UDP-glucose 4-epimerase, putative
- polysaccharide biosynthesis family protein
- putative UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase)
- UDP-glucose 4-epimerase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1197479..1198459
- synteny block?: BlockID0004720
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0129
08BA02176:
C248_0117
11819-97:
MS7_0119
6850:
RSAU_000082
71193:
ST398NM01_0141
ECT-R 2:
ECTR2_84
ED133:
SAOV_0076
ED98:
SAAV_0096
HO 5096 0412:
SAEMRSA15_00950
JH1:
SaurJH1_0119
JH9:
SaurJH9_0114
JKD6008:
SAA6008_00106
JKD6159:
SAA6159_00111
LGA251:
SARLGA251_01030
M013:
M013TW_0118
MRSA252:
SAR0130
MSHR1132:
SAMSHR1132_01040
MSSA476:
SAS0102
Mu3:
SAHV_0127
Mu50:
SAV0128
MW2:
MW0102
RF122:
SAB0067
ST398:
—
T0131:
SAT0131_00115 (ispA)
TCH60:
HMPREF0772_10370 (galE2)
TW20:
SATW20_01390
USA300_TCH1516:
USA300HOU_0140 (galE)
VC40:
SAVC_00380
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ---MERVLITGGAGFIGSHLVDDLQQDYDVYVLDNYRTGKRENIKSLADDHVFELDIREY
N315 ---MERVLITGGAGFIGSHLVDDLQQDYDVYVLDNYRTGKRENIKSLADDHVFELDIREY
NCTC8325 MEDLERVLITGGAGFIGSHLVDDLQQDYDVYVLDNYRTGKRENIKSLADDHVFELDIREY
Newman -------MITGGAGFIGSHLVDDLQQDYDVYVLDNYRTGKRENIKSLADDHVFELDIREY
USA300_FPR3757 MEDLERVLITGGAGFIGSHLVDDLQQDYDVYVLDNYRTGKRENIKSLADDHVFELDIREY
:****************************************************
COL DAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNNHIKRFI
N315 DAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNSHIKRFI
NCTC8325 DAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNNHIKRFI
Newman DAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNNHIKRFI
USA300_FPR3757 DAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNNHIKRFI
*****************************************************.******
COL FASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPTAVVKFFNVFG
N315 FASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPTAVVKFFNVFG
NCTC8325 FASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPTAVVKFFNVFG
Newman FASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPTAVVKFFNVFG
USA300_FPR3757 FASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPTAVVKFFNVFG
************************************************************
COL PRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRLIMEHKDAIGH
N315 PRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRLIMEHKDAIGH
NCTC8325 PRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRLIMEHKDAIGH
Newman PRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRLIMEHKDAIGH
USA300_FPR3757 PRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRLIMEHKDAIGH
************************************************************
COL GYNIGTGTFTNLLEVYRIIGELYGKSVEHEFKEARKGDIKHSYADISNLKALGFVPKYTV
N315 GYNIGTGTFTNLLEVYRIIGELYGKSVEHEFKEARKGDIKHSYADISNLKALGFVPKYTV
NCTC8325 GYNIGTGTFTNLLEVYRIIGELYGKSVEHEFKEARKGDIKHSYADISNLKALGFVPKYTV
Newman GYNIGTGTFTNLLEVYRIIGELYGKSVEHEFKEARKGDIKHSYADISNLKALGFVPKYTV
USA300_FPR3757 GYNIGTGTFTNLLEVYRIIGELYGKSVEHEFKEARKGDIKHSYADISNLKALGFVPKYTV
************************************************************
COL ETGLKDYFNFEVDNIEEVTAKEVEMS
N315 ETGLKDYFNFEVDNIEEVTAKEVEMS
NCTC8325 ETGLKDYFNFEVDNIEEVTAKEVEMS
Newman ETGLKDYFNFEVDNIEEVTAKEVEMS
USA300_FPR3757 ETGLKDYFNFEVDNIEEVTAKEVEMS
**************************