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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000959000
- symbol?: —
- synonym:
- description?: bifunctional metallophosphatase/5'-nucleotidase
- bifunctional metallophosphatase/5'-nucleotidase
- 2,3-cyclic-nucleotide 2-phosphodiesterase, putative
- 5' nucleotidase
- 5' nucleotidase family protein
- 2,3-cyclic-nucleotide 2-phosphodiesterase
- 2'-3'-cyclic-nucleotide 2'-phosphodiesterase
- 5'-nucleotidase domain-containing protein
- Nucleotidase
- putative nucleotidase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1219452..1220953
- synteny block?: BlockID0004940
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0146
08BA02176:
C248_0134
11819-97:
MS7_0136
6850:
RSAU_000099 (cpdB)
71193:
ST398NM01_0159
ECT-R 2:
ECTR2_102
ED133:
SAOV_0092
ED98:
SAAV_0113
HO 5096 0412:
SAEMRSA15_01110
JH1:
SaurJH1_0136
JH9:
SaurJH9_0131
JKD6008:
SAA6008_00123 (ushA)
JKD6159:
SAA6159_00128 (ushA)
LGA251:
SARLGA251_01190
M013:
M013TW_0135
MRSA252:
SAR0147
MSHR1132:
SAMSHR1132_01210
MSSA476:
SAS0119
Mu3:
SAHV_0144
Mu50:
SAV0145
MW2:
MW0119
RF122:
SAB0086 (cpdB)
ST398:
SAPIG0159
T0131:
SAT0131_00134
TCH60:
HMPREF0772_10353
TW20:
SATW20_01560
USA300_TCH1516:
USA300HOU_0157
VC40:
SAVC_00470
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL --MSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFL
N315 --MSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFL
NCTC8325 --MSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFL
Newman MRMSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFL
USA300_FPR3757 --MSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFL
**********************************************************
COL QGSPFCNYLIAHSGSSQPLVDFYNRMAFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCAN
N315 QGSPFCNYLIAHSGSSQPLVDFYNQMAFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCAN
NCTC8325 QGSPFCNYLIAHSGSSQPLVDFYNRMAFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCAN
Newman QGSPFCNYLIAHSGSSQPLVDFYNRMAFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCAN
USA300_FPR3757 QGSPFCNYLIAHSGSSQPLVDFYNRMAFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCAN
************************:***********************************
COL IYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPE
N315 IYENDSTLTDNGVQYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFETLQQHLPE
NCTC8325 IYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPE
Newman IYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPE
USA300_FPR3757 IYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPE
*************:************************************** ***:***
COL MKRHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAFSKDIDIFITGHQHRQIAE
N315 MKRHADIIVVCYHGGFEKDLENGTPTEVLTGENEGYAMLEAFSKDIDIFITGHQHRQIAE
NCTC8325 MKRHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAFSKDIDIFITGHQHRQIAE
Newman MKRHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAFSKDIDIFITGHQHRQIAE
USA300_FPR3757 MKRHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAFSKDIDIFITGHQHRQIAE
*********************.**************************************
COL RFKQTAVIQPGTRGTTVGRVVLSTDEYENLSVESCELLPVIDDSTFTIDEDDQHLRKQLE
N315 RFKQTAVIQPGTRGTTVGKVVLSTDEYENVSVESCELLPVIDDSTFTIDEDDQHLRKQLE
NCTC8325 RFKQTAVIQPGTRGTTVGRVVLSTDEYENLSVESCELLPVIDDSTFTIDEDDQHLRKQLE
Newman RFKQTAVIQPGTRGTTVGRVVLSTDEYENLSVESCELLPVIDDSTFTIDEDDQHLRKQLE
USA300_FPR3757 RFKQTAVIQPGTRGTTVGRVVLSTDEYENLSVESCELLPVIDDSTFTIDEDDQHLRKQLE
******************:**********:******************************
COL DWLDYEITTLPYDMTINHAFEARVAPHPFTNFMNYALLEKSDADVACTALFDSASGFKQV
N315 DWLDYEITTLPYDMTINHAFEARVAPHPFTNFMNYALLEKSDADVACTALFDSASGFKQV
NCTC8325 DWLDYEITTLPYDMTINHAFEARVAPHPFTNFMNYALLEKSDADVACTALFDSASGFKQV
Newman DWLDYEITTLPYDMTINHAFEARVAPHPFTNFMNYALLEKSDADVACTALFDSASGFKQV
USA300_FPR3757 DWLDYEITTLPYDMTINHAFEARVAPHPFTNFMNYALLEKSDADVACTALFDSASGFKQV
************************************************************
COL VTMRDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDVKNDEVSVSADFLEPKPQHFNY
N315 VTMRDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDVQNDEVSVSADFLGPKPQHFNY
NCTC8325 VTMRDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDVKNDEVSVSADFLEPKPQHFNY
Newman VTMRDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDVKNDEVSVSADFLEPKPQHFNY
USA300_FPR3757 VTMRDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDVKNDEVSVSADFLEPKPQHFNY
***************************************:*********** ********
COL DIYGGVSYTIHVGRPKGQRVSNMMIQGHAVDLKQTYTICVNNYRAVGGGQYDMYIDAPVV
N315 DIYGGVSYTIHVGRPKGQRVSNMMIQGHAVDLKQTYTICVNNYRAVGGGQYDMFIDAPVV
NCTC8325 DIYGGVSYTIHVGRPKGQRVSNMMIQGHAVDLKQTYTICVNNYRAVGGGQYDMYIDAPVV
Newman DIYGGVSYTIHVGRPKGQRVSNMMIQGHAVDLKQTYTICVNNYRAVGGGQYDMYIDAPVV
USA300_FPR3757 DIYGGVSYTIHVGRPKGQRVSNMMIQGHAVDLKQTYTICVNNYRAVGGGQYDMYIDAPVV
*****************************************************:******
COL KDIQVEGAQLLIDFLSNNNLMRIPQVVDFKVEK
N315 KDIQVEGAQLLIDFLSNNNLMRIPQVVDFKVEK
NCTC8325 KDIQVEGAQLLIDFLSNNNLMRIPQVVDFKVEK
Newman KDIQVEGAQLLIDFLSNNNLMRIPQVVDFKVEK
USA300_FPR3757 KDIQVEGAQLLIDFLSNNNLMRIPQVVDFKVEK
*********************************