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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001028000
- symbol?: brnQ1
- synonym:
- description?: branched-chain amino acid transport system II carrier protein
- branched-chain amino acid transport system II carrier protein
- branched-chain amino acid transporter II carrier protein
- branched-chain amino acid transport system II carrier protein, putative
- Branched-chain amino acid transport system carrier protein
- putative branched-chain amino acid transport system carrier protein
- branched chain amino acid ABC transporter carrier protein
- LIVCS family amino acid:cation symporter
- LIVCS family branched chain amino acid:cation symporter
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1300077..1301432
- synteny block?: BlockID0005550
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0187
08BA02176:
C248_0177
11819-97:
MS7_0179
6850:
RSAU_000137 (brnQ1)
71193:
ST398NM01_0203
ECT-R 2:
ECTR2_149 (brnQ)
ED133:
SAOV_0130 (brnQ1)
ED98:
SAAV_0154 (brnQ1)
HO 5096 0412:
SAEMRSA15_01510
JH1:
SaurJH1_0176
JH9:
SaurJH9_0171
JKD6008:
SAA6008_00164 (brnQ1)
JKD6159:
SAA6159_00167 (brnQ1)
LGA251:
SARLGA251_01570
M013:
M013TW_0173
MRSA252:
SAR0187
MSHR1132:
SAMSHR1132_01610
MSSA476:
SAS0161
Mu3:
SAHV_0185
Mu50:
SAV0186
MW2:
MW0160
RF122:
SAB0126c
ST398:
SAPIG0203 (brnQ)
T0131:
SAT0131_00178
TCH60:
HMPREF0772_10313 (brnQ2)
TW20:
SATW20_01960
USA300_TCH1516:
USA300HOU_0199
VC40:
SAVC_00695
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKKLTFKENMFIGSMLFGLFFGAGNLIFPIHLGQAAGSNVFIANLGFLITAIGLPFLGI
N315 MKKKLTFKENMFIGSMLFGLFFGAGNLIFPIHLGQAAGSNVFIANLGFLITAIGLPFLGI
NCTC8325 MKKKLTFKENMFIGSMLFGLFFGAGNLIFPIHLGQAAGSNVFIANLGFLITAIGLPFLGI
Newman MKKKLTFKENMFIGSMLFGLFFGAGNLIFPIHLGQAAGSNVFIANLGFLITAIGLPFLGI
USA300_FPR3757 MKKKLTFKENMFIGSMLFGLFFGAGNLIFPIHLGQAAGSNVFIANLGFLITAIGLPFLGI
************************************************************
COL IAIGISKTSGLFEIASRVNKTYAYIFTIALYLVIGPFFALPRLATTSFEIAFSPFLSPKQ
N315 IAIGISKTSGLFEIASRVNKTYAYIFTIALYLVIGPFFALPRLATTSFEIAFSPFLSPKQ
NCTC8325 IAIGISKTSGLFEIASRVNKTYAYIFTIALYLVIGPFFALPRLATTSFEIAFSPFLSPKQ
Newman IAIGISKTSGLFEIASRVNKTYAYIFTIALYLVIGPFFALPRLATTSFEIAFSPFLSPKQ
USA300_FPR3757 IAIGISKTSGLFEIASRVNKTYAYIFTIALYLVIGPFFALPRLATTSFEIAFSPFLSPKQ
************************************************************
COL ITLYLFIFSFVFFVIAWFFARKPSRILEYIGKFLNPVFLVLLAIILLFAFIHPLGGISDA
N315 ITLYLFIFSFVFFVIAWFFARKPSRILEYIGKFLNPVFLVLLAIILLFAFIHPLGGISDA
NCTC8325 ITLYLFIFSFVFFVIAWFFARKPSRILEYIGKFLNPVFLVLLAIILLFAFIHPLGGISDA
Newman ITLYLFIFSFVFFVIAWFFARKPSRILEYIGKFLNPVFLVLLAIILLFAFIHPLGGISDA
USA300_FPR3757 ITLYLFIFSFVFFVIAWFFARKPSRILEYIGKFLNPVFLVLLAIILLFAFIHPLGGISDA
************************************************************
COL PISKQYQSHALFNGFLDGYNTLDALASLAFGIIIVATIKKLGIENPTDIAKETIKSGTIS
N315 PISKQYQSHALFNGFLDGYNTLDALASLAFGIIIVATIKKLGIENPTDIAKETIKSGTIS
NCTC8325 PISKQYQSHALFNGFLDGYNTLDALASLAFGIIIVATIKKLGIENPTDIAKETIKSGTIS
Newman PISKQYQSHALFNGFLDGYNTLDALASLAFGIIIVATIKKLGIENPTDIAKETIKSGTIS
USA300_FPR3757 PISKQYQSHALFNGFLDGYNTLDALASLAFGIIIVATIKKLGIENPTDIAKETIKSGTIS
************************************************************
COL IIMMGIIYTLLAIMGTLSIGNFKLSENGGIALAQITQYYLGNYGIVLLSLIVMVACLKTA
N315 IIMMGIIYTLLAIMGTLSIGHFKLSENGGIALAQITQYYLGNYGIVLLSLIVMVACLKTA
NCTC8325 IIMMGIIYTLLAIMGTLSIGHFKLSENGGIALAQITQYYLGNYGIVLLSLIVMVACLKTA
Newman IIMMGIIYTLLAIMGTLSIGHFKLSENGGIALAQITQYYLGNYGIVLLSLIVMVACLKTA
USA300_FPR3757 IIMMGIIYTLLAIMGTLSIGHFKLSENGGIALAQITQYYLGNYGIVLLSLIVMVACLKTA
********************:***************************************
COL IGLITAFSETFEHLFPKMNYLAIATVVSFISFLFANVGLTKIIMYSVPVLMFLYPLAIAL
N315 IGLITAFSETFEHLFPKMNYLAIATVVSFISFLFANVGLTKIIMYSVPVLMFLYPLAIAL
NCTC8325 IGLITAFSETFEHLFPKMNYLAIATVVSFISFLFANVGLTKIIMYSVPVLMFLYPLAIAL
Newman IGLITAFSETFEHLFPKMNYLAIATVVSFISFLFANVGLTKIIMYSVPVLMFLYPLAIAL
USA300_FPR3757 IGLITAFSETFEHLFPKMNYLAIATVVSFISFLFANVGLTKIIMYSVPVLMFLYPLAIAL
************************************************************
COL IVLTLFSSKFHHSKLIYQCTIFFTMIAALVDGLKASPEFISSTSFSQTLINFSQKYLPLS
N315 IVLTLFSSKFHHSKIIYQCTIFFTMIAALVDGLKASPEFISSTSFSQTLINFSQKYLPLS
NCTC8325 IVLTLFSSKFHHSKLIYQCTIFFTMIAALVDGLKASPEFISSTSFSQTLINFSQKYLPLS
Newman IVLTLFSSKFHHSKLIYQCTIFFTMIAALVDGLKASPEFISSTSFSQTLINFSQKYLPLS
USA300_FPR3757 IVLTLFSSKFHHSKLIYQCTIFFTMIAALVDGLKASPEFISSTSFSQTLINFSQKYLPLS
**************:*********************************************
COL DIGMGWVVLSLIGFIIGFIIYKIKHRKIPQA
N315 DIGMGWVVLSLIGFIIGFIIYKIKHRKIP--
NCTC8325 DIGMGWVVLSLIGFIIGFIIYKIKHRKIPQA
Newman DIGMGWVVLSLIGFIIGFIIYKIKHRKIPQA
USA300_FPR3757 DIGMGWVVLSLIGFIIGFIIYKIKHRKIPQA
*****************************