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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001168000
- symbol?: —
- synonym:
- description?: hypothetical protein
- strand?: -
- coordinates?: 1438116..1439641
- synteny block?: BlockID0006880
- occurrence?: in 94% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0280
08BA02176:
C248_0270
11819-97:
MS7_0271
6850:
RSAU_000226
71193:
ST398NM01_0295
ECT-R 2:
ECTR2_241
ED133:
SAOV_0221
ED98:
SAAV_0248
HO 5096 0412:
SAEMRSA15_02390
JH1:
SaurJH1_0271
JH9:
SaurJH9_0264
JKD6008:
SAA6008_00254
JKD6159:
SAA6159_00258
LGA251:
SARLGA251_02440
M013:
M013TW_0261
MRSA252:
SAR0277
MSHR1132:
SAMSHR1132_02460
MSSA476:
SAS0256
Mu3:
SAHV_0278
Mu50:
SAV0280
MW2:
MW0256
RF122:
SAB0219c
ST398:
SAPIG0295
T0131:
—
TCH60:
HMPREF0772_10220
TW20:
SATW20_02820
USA300_TCH1516:
USA300HOU_0293
VC40:
—
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL -----MSKKLKIIIPIIIVLLLIGGIAWGVYAFFANTPKNTYLKSEQQTAKMYKDYFNDR
N315 -----MSKKLKIIIPIIIVLLLIGGIAWGVYAFFANTPKNTYLKSEQQTAKMYKDYFNDR
NCTC8325 -----MSKKLKIIIPIIIVLLLIGGIAWGVYAFFANTPKNTYLKSEQQTAKMYKDYFNDR
Newman MGGSKMSKKLKIIIPIIIVLLLIGGIAWGVYAFFANTPKNTYLKSEQQTAKMYKDYFNDR
USA300_FPR3757 -----MSKKLKIIIPIIIVLLLIGGIAWGVYAFFANTPKNTYLKSEQQTAKMYKDYFNDR
*******************************************************
COL FENEVKFQEKMKDNSFLSSLELSADASDEIVKGLGIPKSVVNASKIKMSYGHDPKKEKSM
N315 FENEVKFQEKMKDNSFLSSLELSADASDEIVKGLGIPKSVVNASKIKMSYGHDPKKEKSM
NCTC8325 FENEVKFQEKMKDNSFLSSLELSADASDEIVKGLGIPKSVVNASKIKMSYGHDPKKEKSM
Newman FENEVKFQEKMKDNSFLSSLELSADASDEIVKGLGIPKSVVNASKIKMSYGHDPKKEKSM
USA300_FPR3757 FENEVKFQEKMKDNSFLSSLELSADASDEIVKGLGIPKSVVNASKIKMSYGHDPKKEKSM
************************************************************
COL INLEPTIADSALGKFQLAADKDKHYFESPLFKGKYSVNNSDLLSTYSKLTGEDEETAKEN
N315 INLEPTIADSALGKFQLAADKDKHYFESPLFKGKYSVNNSDLLSTYSKLTGEDEETAKEN
NCTC8325 INLEPTIADSALGKFQLAADKDKHYFESPLFKGKYSVNNSDLLSTYSKLTGEDEETAKEN
Newman INLEPTIADSALGKFQLAADKDKHYFESPLFKGKYSVNNSDLLSTYSKLTGEDEETAKEN
USA300_FPR3757 INLEPTIADSALGKFQLAADKDKHYFESPLFKGKYSVNNSDLLSTYSKLTGEDEETAKEN
************************************************************
COL GITNQQLNLNTLFNNAQAQQSDYSKIAEKYSELIVDKLDDDNFDKGKKEEIKVNGEKYKV
N315 GITNQQLNLNTLFSNAQAQQSDYSKIAEKYSELIVDKLDDDNFDKGKKEEIKVNGEKYKV
NCTC8325 GITNQQLNLNTLFNNAQAQQSDYSKIAEKYSELIVDKLDDDNFDKGKKEEIKVNGEKYKV
Newman GITNQQLNLNTLFNNAQAQQSDYSKIAEKYSELIVDKLDDDNFDKGKKEEIKVNGEKYKV
USA300_FPR3757 GITNQQLNLNTLFNNAQAQQSDYSKIAEKYSELIVDKLDDDNFDKGKKEEIKVNGEKYKV
*************.**********************************************
COL RPVTLTLSRADTKKITLAVLEEAKKDKDLKKLMEEQGARKDFEKDIKKAIDDVKETKKDE
N315 RPVTLTLSRADTKKITLAVLEEAKKDKDLKKLMEEQGATKDYDKDIKKAIDDVKETKKDE
NCTC8325 RPVTLTLSRADTKKITLAVLEEAKKDKDLKKLMEEQGATKDFEKDIKKAIDDVKETKKDE
Newman RPVTLTLSRADTKKITLAVLEEAKKDKDLKKLMEEQGATKDFEKDIKKAIDDVKETKKDE
USA300_FPR3757 RPVTLTLSRADTKKITLAVLEEAKKDKDLKKLMEEQGATKDFEKDIKKAIDDVKETKKDE
************************************** **::*****************
COL FAKIQSKIYTEKHTIVKREITITDKENNKTKIKGTNTLEDDKLKLDYALDFDQDKYTYAE
N315 FAKIQSKIYTEKHTIVKREITITDKENNKTKIKGTNTLEDDKLKLDYALDFDQDKYTYAE
NCTC8325 FAKIQSKIYTEKHTIVKREITITDKENNKTKIKGTNTLEDDKLKLDYALDFDQDKYTYAE
Newman FAKIQSKIYTEKHTIVKREITITDKENNKTKIKGTNTLEDDKLK----------------
USA300_FPR3757 FAKIQSKIYTEKHTIVKREITITDKENNKTKIKGTNTLEDDKLKLDYALDFDQDKYTYAE
********************************************
COL AKYTIKGVSSKEKDNKYNDKYEFGKKTEYDESKIKLDNQEKVDGTKRQDKGKITVALDKY
N315 AKYTIKGVSSKEKDNKYSDKYEFGKKTEYDESKIKLDNQEKVDGTKRQDKGKITVALDKY
NCTC8325 AKYTIKGVSSKEKDNKYNDKYEFGKKTEYDESKIKLDNQEKVDGTKRQDKGKITVALDKY
Newman ------------------------------------------------------------
USA300_FPR3757 AKYTIKGVSSKEKDNKYNDKYEFGKKTEYDESKIKLDNQEKVDGTKRQDKGKITVALDKY
COL SDENEFTFENNIDSDVKNNTQKSTLNIGIKYAEEPINFILKSSTKLKADIDFDDSGAKDF
N315 SDENEFTFENNIDSDVKNNTQKSTLNIGIKYAEEPINFILKSSTKLKADIDFDDSGAKDF
NCTC8325 SDENEFTFENNIDSDVKNNTQKSTLNIGIKYAEEPINFILKSSTKLKADIDFDDSGAKDF
Newman -------------------------------------------TRLRT------------
USA300_FPR3757 SDENEFTFENNIDSDVKNNTQKSTLNIGIKYAEEPINFILKSSTKLKADIDFDDSGAKDF
*:*::
COL NSLSSKDREKLEKEIEKNGGKMFESILKKASK
N315 NSLSSKDREKLEKEIEKNGGKMFESILKKASK
NCTC8325 NSLSSKDREKLEKEIEKNGGKMFESILKKASK
Newman --------------------------------
USA300_FPR3757 NSLSSKDREKLEKEIEKNGGKMFESILKKASK