PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN001188000
• symbol^?: esxD
• synonym:
• description^?: hypothetical protein
• strand^?: +
• coordinates^?: 1458536..1459691
• synteny block^?: BlockID0007040
• occurrence^?: in 67% of 33 strains

⊟Orthologs

COL:
SACOL0280
N315:
SA0280
NCTC8325:
SAOUHSC_00267
Newman:
NWMN_0227
USA300_FPR3757:
SAUSA300_0287
04-02981:
SA2981_0291
08BA02176:
—
11819-97:
MS7_0282
6850:
RSAU_000237
71193:
—
ECT-R 2:
ECTR2_252
ED133:
SAOV_0234
ED98:
SAAV_0259
HO 5096 0412:
—
JH1:
SaurJH1_0282
JH9:
SaurJH9_0275
JKD6008:
—
JKD6159:
SAA6159_00272
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
SAMSHR1132_02590
MSSA476:
SAS0267
Mu3:
SAHV_0289
Mu50:
SAV0292
MW2:
MW0267
RF122:
SAB0232
ST398:
—
T0131:
—
TCH60:
—
TW20:
—
USA300_TCH1516:
USA300HOU_0306
VC40:
SAVC_01210

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MTLSGKISVKAETIAHVVKELESISQKYDEIAQNFGKIAQLNYYSSEKAAHSMENGYSSA
  N315            MTLSGKISVKAETIAHVVKELESISQKYDEIAQNFGKIAQLNYYSSEKAAHSMENGYSSA
  NCTC8325        MTLSGKISVKAETIAHVVKELESISQKYDEIAQNFGKIAQLNYYSSEKAAHSMENGYSSA
  Newman          MTLSGKISVKAETIAHVVKELESISQKYDEIAQNFGKIAQLNYYSSEKAAHSMENGYSSA
  USA300_FPR3757  MTLSGKISVKAETIAHVVKELESISQKYDEIAQNFGKIAQLNYYSSEKAAHSMENGYSSA
                  ************************************************************
  
  COL             ATVISGLKGPLSTLGGGVMNSAQKFFEADEHWGTEFAKLYYNIEG
  N315            ATVISGLKGPLSTLGGGVMNSAQKFFEADEHWGTEFAKLYYNIEG
  NCTC8325        ATVISGLKGPLSTLGGGVMNSAQKFFEADEHWGTEFAKLYYNIEG
  Newman          ATVISGLKGPLSTLGGGVMNSAQKFFEADEHWGTEFAKLYYNIEG
  USA300_FPR3757  ATVISGLKGPLSTLGGGVMNSAQKFFEADEHWGTEFAKLYYNIEG
                  *********************************************