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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001832000
- symbol?: —
- synonym:
- description?: ATP-dependent Clp protease ClpP
- ATP-dependent Clp protease ClpP
- phiSLT ORF257-like protein prophage protease
- prophage L54a, Clp protease
- scaffolding protease
- bacteriophage protease
- clp protease family protein
- peptidase S14, ClpP
- peptidase S14 ClpP
- phage Clp protease
- phage protease
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 2277313..2278086
- synteny block?: BlockID0012080
- occurrence?: in 44% of 34 strains
hmp : serogroup A prophage head maturation protease [1]
Serogroup A prophage capsids consist of a major capsid-scaffolding fusion protein that requires cleavage to generate mature capsids. Head maturation protease removes the serogroup A mcp δ domain by proteolytic cleavage. This crotonase-like paralogue specifically cleaves serogroup A mcp between lysine-128 and leucine-129.
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
C248_0351
11819-97:
MS7_1466
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
SAAV_2030
HO 5096 0412:
SAEMRSA15_13720
JH1:
SaurJH1_1081
JH9:
SaurJH9_1061
JKD6008:
—
JKD6159:
—
JSNZ:
—
LGA251:
—
M013:
—
MRSA252:
SAR1517
MSHR1132:
—
MSSA476:
SAS0934
Mu3:
—
Mu50:
—
MW2:
MW1399
RF122:
—
ST398:
SAPIG0375
T0131:
—
TCH60:
HMPREF0772_11692
TW20:
—
USA300_TCH1516:
USA300HOU_1451
VC40:
—
⊟Genome Viewer[edit | edit source]
| COL | |
| NCTC8325 | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSMKAKYFQMKRKSKSKGEIFIYGDIVSDKWFESDVTATDFKNKLDELGDISEIDVHINS
NCTC8325 MSMKAKYFQMKRKSKSKGEIFIYGDIVSDKWFESDVTATDFKNKLDELGDISEIDVHINS
USA300_FPR3757 MSMKAKYFQMKRKSKSKGEIFIYGDIVSDKWFESDVTATDFKNKLDELGDISEIDVHINS
************************************************************
COL SGGSVFEGHAIYNMLKMHPAKINIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSWVM
NCTC8325 SGGSVFEGHAIYNMLKMHPAKINIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSWVM
USA300_FPR3757 SGGSVFEGHAIYNMLKMHPAKINIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSWVM
************************************************************
COL TVGNAEELRKTADLLEKTDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLID
NCTC8325 TVGNAEELRKTADLLEKTDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLID
USA300_FPR3757 TVGNAEELRKTADLLEKTDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLID
************************************************************
COL EILGANEIAASISKEQYKRFENVPEDLKKDVDKITKIDDVDTSELVETPKESMSLEEKEK
NCTC8325 EILGANEIAASISKEQYKRFENVPEDLKKDVDKITKIDDVDTSELVETPKESMSLEEKEK
USA300_FPR3757 EILGANEIAASISKEQYKRFENVPEDLKKDVDKITKIDDVDTSELVETPKESMSLEEKEK
************************************************************
COL REKIKRECEILKMTMNY
NCTC8325 REKIKRECEILKMTMNY
USA300_FPR3757 REKIKRECEILKMTMNY
*****************
- ↑ R L Duda, J Hempel, H Michel, J Shabanowitz, D Hunt, R W Hendrix
Structural transitions during bacteriophage HK97 head assembly.
J Mol Biol: 1995, 247(4);618-35
[PubMed:7723019] [WorldCat.org] [DOI] (P p)F Desiere, S Lucchini, H Brüssow
Comparative sequence analysis of the DNA packaging, head, and tail morphogenesis modules in the temperate cos-site Streptococcus thermophilus bacteriophage Sfi21.
Virology: 1999, 260(2);244-53
[PubMed:10417259] [WorldCat.org] [DOI] (P p)