Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN002220000
- symbol?: ricT
- synonym:
- description?: signal peptidase II
- signal peptidase II
- PSP1-like protein
- stage 0 sporulation family protein
- Stage 0 sporulation protein YaaT
- phosphorelay inhibitor
- PSP1 C-terminal conserved region family protein
- PSP1 domain-containing protein
- signal peptidase II-like protein
- Signal peptidase-like protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2732833..2733636
- synteny block?: BlockID0015190
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0460
08BA02176:
C248_0539 (yaaT)
11819-97:
MS7_0462
6850:
RSAU_000422 (yaaT)
71193:
ST398NM01_0551
ECT-R 2:
ECTR2_425
ED133:
SAOV_0506
ED98:
SAAV_0431
HO 5096 0412:
SAEMRSA15_04110
JH1:
SaurJH1_0519
JH9:
SaurJH9_0506
JKD6008:
SAA6008_00489
JKD6159:
SAA6159_00436
LGA251:
SARLGA251_04190
M013:
M013TW_0454
MRSA252:
SAR0486
MSHR1132:
SAMSHR1132_04290
MSSA476:
SAS0442
Mu3:
SAHV_0482
Mu50:
SAV0485
MW2:
MW0440
RF122:
SAB0434
ST398:
SAPIG0551
T0131:
SAT0131_00530 (ribD)
TCH60:
HMPREF0772_10036
TW20:
SATW20_05530
USA300_TCH1516:
USA300HOU_0484
VC40:
SAVC_02010
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MPNVIGVQFQKAGKLEYYTPNDIQVDIEDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPL
N315 --------------------------------------------------------MLPL
NCTC8325 MPNVIGVQFQKAGKLEYYTPNDIQVDIEDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPL
Newman MPNVIGVQFQKAGKLEYYTPNDIQVDIEDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPL
USA300_FPR3757 MPNVIGVQFQKAGKLEYYTPNDIQVDIEDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPL
:***
COL KNIIRIADDKDIDKFNCNERDAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTA
N315 KNIIRIADDKDIDKFNCNERDAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTA
NCTC8325 KNIIRIADDKDIDKFNCNERDAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTA
Newman KNIIRIADDKDIDKFNCNERDAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTA
USA300_FPR3757 KNIIRIADDKDIDKFNCNERDAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTA
************************************************************
COL DDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGPCGRSLCCSTFLGDFEPVSIK
N315 DDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGPCGRSLCCSTFLGDFEPVSIK
NCTC8325 DDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGPCGRSLCCSTFLGDFEPVSIK
Newman DDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGPCGRSLCCSTFLGDFEPVSIK
USA300_FPR3757 DDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGPCGRSLCCSTFLGDFEPVSIK
************************************************************
COL MAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
N315 MAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
NCTC8325 MAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
Newman MAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
USA300_FPR3757 MAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
************************************************************
COL LDISMQVKLEGHEQPLEYKLEEIETMH
N315 LDISMQVKLEGHEQPLEYKLEEIETMH
NCTC8325 LDISMQVKLEGHEQPLEYKLEEIETMH
Newman LDISMQVKLEGHEQPLEYKLEEIETMH
USA300_FPR3757 LDISMQVKLEGHEQPLEYKLEEIETMH
***************************