Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN003347000
- symbol?: —
- synonym:
- description?: regulator
- regulator
- putative DUF964-containing protein
- YlbF family regulator
- regulatory protein YlbF
- ComK regulator
- vacuolating cytotoxin paralog
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3715085..3715519
- synteny block?: BlockID0024310
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1076
08BA02176:
C248_1146
11819-97:
MS7_1076
6850:
RSAU_001004
71193:
ST398NM01_1116
ECT-R 2:
ECTR2_974
ED133:
SAOV_1061
ED98:
SAAV_1086
HO 5096 0412:
SAEMRSA15_09490
JH1:
SaurJH1_1201
JH9:
SaurJH9_1179
JKD6008:
SAA6008_01074
JKD6159:
SAA6159_00974
LGA251:
SARLGA251_10320
M013:
M013TW_1051
MRSA252:
SAR1093
MSHR1132:
SAMSHR1132_09660
MSSA476:
SAS1054
Mu3:
SAHV_1111
Mu50:
SAV1119
MW2:
MW1002
RF122:
SAB0984
ST398:
SAPIG1116
T0131:
SAT0131_01158
TCH60:
HMPREF0772_12113 (ylbF)
TW20:
SATW20_11140
USA300_TCH1516:
USA300HOU_1058
VC40:
SAVC_04760
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MINEASLAILDDIDELADMIVASDIYASFEQAKQALENNDEAHLLYQSFLKSKEKYDEVM
N315 MINEASLAILDDIDELADMIVASDIYASFEQAKQALENNDEAHLLYQSFLKSKEKYDEVM
NCTC8325 MINEASLAILDDIDELADMIVASDIYASFEQAKQALENNDEAHLLYQSFLKSKEKYDEVM
USA300_FPR3757 MINEASLAILDDIDELADMIVASDIYASFEQAKQALENNDEAHLLYQSFLKSKEKYDEVM
************************************************************
COL RFGKYHPDYKKVMLETRQRKRAYEMLDVVMHYKAREMALQHLIDEVVTKIAYAVSEHVKI
N315 RFGKYHPDYKKVMLETRQRKRAYEMLDVVMHYKAREMALQHLIDEVVTKIAYAVSEHVKI
NCTC8325 RFGKYHPDYKKVMLETRQRKRAYEMLDVVMHYKAREMALQHLIDEVVTKIAYAVSEHVKI
USA300_FPR3757 RFGKYHPDYKKVMLETRQRKRAYEMLDVVMHYKAREMALQHLIDEVVTKIAYAVSEHVKI
************************************************************
COL ETGNPFFQTSHSGCATGGSCNCSL
N315 ETGNPFFQTSHSGCATGGSCNCSL
NCTC8325 ETGNPFFQTSHSGCATGGSCNCSL
USA300_FPR3757 ETGNPFFQTSHSGCATGGSCNCSL
************************