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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002321000
- symbol?: —
- synonym:
- description?: N-acetyl-L,L-diaminopimelate deacetylase
- N-acetyl-L,L-diaminopimelate deacetylase
- amidohydrolase
- M20/M25/M40 family peptidase
- peptidase, M20-M25-M40 family
- N-acetyl-L,L-diaminopimelate deacetylase-like protein
- amidohydrolase family protein
- Aminoacylase
- M20D family peptidase
- M20D subfamily peptidase
- N-acyl-L-amino acid amidohydrolase
- putative N-acyl-L-amino acid amidohydrolase
- putative peptidase
- thermostable carboxypeptidase 1
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 2840358..2841601
- synteny block?: BlockID0016200
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0526
08BA02176:
C248_0624
11819-97:
MS7_0539
6850:
RSAU_000501
71193:
ST398NM01_0624
ECT-R 2:
ECTR2_503
ED133:
SAOV_0584c
ED98:
SAAV_0512
HO 5096 0412:
SAEMRSA15_04760
JH1:
SaurJH1_0586
JH9:
SaurJH9_0572
JKD6008:
SAA6008_00555
JKD6159:
SAA6159_00503
LGA251:
SARLGA251_04850
M013:
M013TW_0536
MRSA252:
SAR0554
MSHR1132:
SAMSHR1132_04930
MSSA476:
SAS0507
Mu3:
SAHV_0547
Mu50:
SAV0549
MW2:
MW0504
RF122:
SAB0500c
ST398:
SAPIG0624
T0131:
SAT0131_00602
TCH60:
HMPREF0772_12640
TW20:
SATW20_06190
USA300_TCH1516:
USA300HOU_0542
VC40:
SAVC_02335
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ---MLDWFQLANNKENKTIQLRRYLHQYPELSFEEFQTHDYIVNQLSQLSCDIETPIGRN
N315 ---MLDWFQLANNKENKTIQLRRYLHQYPELSFEEFQTHDYIVNQLSQLSCDIETPIGRN
NCTC8325 ---MLDWFQLANNKENKTIQLRRYLHQYPELSFEEFQTHDYIVNQLSQLSCDIETPIGRN
Newman MIRVLDWFQLANNKENKTIQLRRYLHQYPELSFEEFQTHDYIVNQLSQLSCDIETPIGRN
USA300_FPR3757 ---MLDWFQLANNKENKTIQLRRYLHQYPELSFEEFQTHDYIVNQLSQLSCDIETPIGRN
:********************************************************
COL GIKATFKGLGTGPTIALRADFDALPVEELNDVPYKSKNPGCMHACGHDGHTAILLTVAEI
N315 GIKATFKGLGTGPTIALRADFDALPVEELNDVPYKSKNPGCMHACGHDGHTAILLTVAEI
NCTC8325 GIKATFKGLGTGPTIALRADFDALPVEELNDVPYKSKNPGCMHACGHDGHTAILLTVAEI
Newman GIKATFKGLGTGPTIALRADFDALPVEELNDVPYKSKNPGCMHACGHDGHTAILLTVAEI
USA300_FPR3757 GIKATFKGLGTGPTIALRADFDALPVEELNDVPYKSKNPGCMHACGHDGHTAILLTVAEI
************************************************************
COL LDEHKHLLEGNVVLIFQYGEEIMPGGSQEMIDAGCLENVDRIYGTHLWSGYPTGTIHSRA
N315 LDEHKHLLEGNVVLIFQYGEEIMPGGSQEMIDAGCLENVDRIYGTHLWSGYPTGTIHSRA
NCTC8325 LDEHKHLLEGNVVLIFQYGEEIMPGGSQEMIDAGCLENVDRIYGTHLWSGYPTGTIHSRA
Newman LDEHKHLLEGNVVLIFQYGEEIMPGGSQEMIDAGCLENVDRIYGTHLWSGYPTGTIHSRA
USA300_FPR3757 LDEHKHLLEGNVVLIFQYGEEIMPGGSQEMIDAGCLENVDRIYGTHLWSGYPTGTIHSRA
************************************************************
COL GAIMASPDEFSVTFKGRGGHGAKPHETIDPIVIMAEFILSAQKIISRTIDPVKQAVLSFG
N315 GAIMASPDEFSVTIKGRGGHGAKPHETIDPIVIMAEFILSAQKIISRTIDPVKQAVLSFG
NCTC8325 GAIMASPDEFSVTFKGRGGHGAKPHETIDPIVIMAEFILSAQKIISRTIDPVKQAVLSFG
Newman GAIMASPDEFSVTFKGRGGHGAKPHETIDPIVIMAEFILSAQKIISRTIDPVKQAVLSFG
USA300_FPR3757 GAIMASPDEFSVTFKGRGGHGAKPHETIDPIVIMAEFILSAQKIISRTIDPVKQAVLSFG
*************:**********************************************
COL MIQAGTTDSVIPDQAFCKGTVRTFDSDIQNHVMDKMDKLLQGLAIANDINYDLNYIKGYL
N315 MIQAGTTDSVIPDQAFCKGTVRTFDSDIQNHVMDKMDKLLQGLAIANDINYDLNYIKGYL
NCTC8325 MIQAGTTDSVIPDQAFCKGTVRTFDSDIQNHVMDKMDKLLQGLAIANDINYDLNYIKGYL
Newman MIQAGTTDSVIPDQAFCKGTVRTFDSDIQNHVMDKMDKLLQGLAIANDINYDLNYIKGYL
USA300_FPR3757 MIQAGTTDSVIPDQAFCKGTVRTFDSDIQNHVMDKMDKLLQGLAIANDINYDLNYIKGYL
************************************************************
COL PVHNNEKAYQVIKEATNDLHVRFNESDLMMIGEDFSHYLKVRPGAFFLTGCGNESKGITA
N315 PVHNNEKAYQVIKEATNDLHVRFNESDLMMIGEDFSHYLKVRPGAFFLTGCGNESKGITA
NCTC8325 PVHNNEKAYQVIKEATNDLHVRFNESDLMMIGEDFSHYLKVRPGAFFLTGCGNESKGITA
Newman PVHNNEKAYQVIKEATNDLHVRFNESDLMMIGEDFSHYLKVRPGAFFLTGCGNESKGITA
USA300_FPR3757 PVHNNEKAYQVIKEATNDLHVRFNESDLMMIGEDFSHYLKVRPGAFFLTGCGNESKGITA
************************************************************
COL PHHNPKFDIDEKSLKYAVAVFLKIIELEQVFKTN
N315 PHHNPKFDIDEKSLKYAVAVFLKIIELEQVFKTN
NCTC8325 PHHNPKFDIDEKSLKYAVAVFLKIIELEQVFKTN
Newman PHHNPKFDIDEKSLKYAVAVFLKIIELEQVFKTN
USA300_FPR3757 PHHNPKFDIDEKSLKYAVAVFLKIIELEQVFKTN
**********************************