Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN002328000
- symbol?: —
- synonym:
- description?: HAD family hydrolase
- HAD family hydrolase
- haloacid dehalogenase-like hydrolase
- HAD superfamily hydrolase
- HAD hydrolase family protein
- haloacid dehalogenase-like family hydrolase
- Hydrolase, haloacid dehalogenase-like family
- phosphoglycolate phosphatase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2848864..2849556
- synteny block?: BlockID0016270
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0532
08BA02176:
C248_0630
11819-97:
MS7_0545
6850:
RSAU_000507
71193:
ST398NM01_0630
ECT-R 2:
ECTR2_509
ED133:
SAOV_0590
ED98:
SAAV_0518
HO 5096 0412:
SAEMRSA15_04820
JH1:
SaurJH1_0592
JH9:
SaurJH9_0578
JKD6008:
SAA6008_00562
JKD6159:
SAA6159_00509
LGA251:
SARLGA251_04910
M013:
M013TW_0542
MRSA252:
SAR0560
MSHR1132:
SAMSHR1132_04990
MSSA476:
SAS0513
Mu3:
SAHV_0553
Mu50:
SAV0555
MW2:
MW0510
RF122:
SAB0506
ST398:
SAPIG0630
T0131:
SAT0131_00609 (cbf1)
TCH60:
HMPREF0772_12634
TW20:
SATW20_06250
USA300_TCH1516:
USA300HOU_0549
VC40:
SAVC_02370
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEWILFDKDGTLIEFDRSWEKIGVRFVQSLLETFPVHNKEAALRQLGVIKESIDPKSVMG
N315 MEWILFDKDGTLIEFDRSWEKIGVRFVQSLLETFPVHNKEAALRQLGVIKESIDPKSVMG
NCTC8325 MEWILFDKDGTLIEFDRSWEKIGVRFVQSLLETFPVHNKEAALRQLGVIKESIDPKSVMG
Newman MEWILFDKDGTLIEFDRSWEKIGVRFVQSLLETFPVHNKEAALRQLGVIKESIDPKSVMG
USA300_FPR3757 MEWILFDKDGTLIEFDRSWEKIGVRFVQSLLETFPVHNKEAALRQLGVIKESIDPKSVMG
************************************************************
COL SGSLQQIIQAFNDVTGQDTTDWSKSTSQKLVDERIPEINWVEGVKEALIDLKAKGYQLGI
N315 SGSLQQIIQAFNDVTGQDTTDWSKSTSQKLVDERIPEINWVEGVKEALIDLKAKGYQLGI
NCTC8325 SGSLQQIIQAFNDVTGQDTTDWSKSTSQKLVDERIPEINWVEGVKEALIDLKAKGYQLGI
Newman SGSLQQIIQAFNDVTGQDTTDWSKSTSQKLVDERIPEINWVEGVKEALIDLKAKGYQLGI
USA300_FPR3757 SGSLQQIIQAFNDVTGQDTTDWSKSTSQKLVDERIPEINWVEGVKEALIDLKAKGYQLGI
************************************************************
COL VTSDTKKGVEQFLAHTNATSLFDLIISTEADAYEKPNPKVLSPLFEQYNVDPQKVAIVGD
N315 VTSDTKKGVEQFLAHTNAISLFDLIISTEADAYEKPNPKVLSPLFEQYNVDPQKVAIVGD
NCTC8325 VTSDTKKGVEQFLAHTNATSLFDLIISTEADAYEKPNPKVLSPLFEQYNVDPQKVAIVGD
Newman VTSDTKKGVEQFLAHTNATSLFDLIISTEADAYEKPNPKVLSPLFEQYNVDPQKVAIVGD
USA300_FPR3757 VTSDTKKGVEQFLAHTNATSLFDLIISTEADAYEKPNPKVLSPLFEQYNVDPQKVAIVGD
****************** *****************************************
COL TANDMKTASNANLGMAIGVLTGIATKEELHEADIILNSAADILEALN
N315 TANDMKTASNANLGMAIGVLTGIATKEELHEADIILNSAADILEALN
NCTC8325 TANDMKTASNANLGMAIGVLTGIATKEELHEADIILNSAADILEALN
Newman TANDMKTASNANLGMAIGVLTGIATKEELHEADIILNSAADILEALN
USA300_FPR3757 TANDMKTASNANLGMAIGVLTGIATKEELHEADIILNSAADILEALN
***********************************************