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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002524000
- symbol?: —
- synonym:
- description?: YitT family protein
- YitT family protein
- YitT family protein, putative
- membrane spanning protein
- putative ABC transporter permease
- YxkD
- YxkD like protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3036782..3037615
- synteny block?: BlockID0017600
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0622
08BA02176:
C248_0729
11819-97:
MS7_0696
6850:
RSAU_000622
71193:
ST398NM01_0724
ECT-R 2:
ECTR2_597
ED133:
SAOV_0680
ED98:
SAAV_0608
HO 5096 0412:
SAEMRSA15_05720
JH1:
SaurJH1_0684
JH9:
SaurJH9_0669
JKD6008:
SAA6008_00662
JKD6159:
SAA6159_00600
LGA251:
SARLGA251_05790
M013:
M013TW_0633
MRSA252:
SAR0656
MSHR1132:
SAMSHR1132_05910
MSSA476:
SAS0611
Mu3:
SAHV_0643
Mu50:
SAV0646
MW2:
MW0608
RF122:
SAB0595
ST398:
SAPIG0724
T0131:
SAT0131_00716 (purB)
TCH60:
HMPREF0772_12542
TW20:
SATW20_07210
USA300_TCH1516:
USA300HOU_0667
VC40:
SAVC_02860
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNKTVKDLILVVLGSFIFAAGVNAFIISGNLGEGGVTGLAIILYYAFHISPAITNFLVNA
N315 ------------------------------------------------------------
NCTC8325 MNKTVKDLILVVLGSFIFAAGVNAFIISGNLGEGGVTGLAIILYYAFHISPAITNFLVNA
Newman MNKTVKDLILVVLGSFIFAAGVNAFIISGNLGEGGVTGLAIILYYAFHISPAITNFLVNA
USA300_FPR3757 MNKTVKDLILVVLGSFIFAAGVNAFIISGNLGEGGVTGLAIILYYAFHISPAITNFLVNA
COL VLIAIGYKFLSKRSMYLTILVTILISIFLSLTESWQVETGNSIVNAIFGGVSVGLGIGVI
N315 --------------MYLTILVTILISIFLSLTESWQVETGNSIVNAIFGGVSVGLGIGVI
NCTC8325 VLIAIGYKFLSKRSMYLTILVTILISIFLSLTESWQVETGNSIVNAIFGGVSVGLGIGVI
Newman VLIAIGYKFLSKRSMYLTILVTILISIFLSLTESWQVETGNSIVNAIFGGVSVGLGIGVI
USA300_FPR3757 VLIAIGYKFLSKRSMYLTILVTILISIFLSLTESWQVETGNSIVNAIFGGVSVGLGIGVI
**********************************************
COL ILAGGTTAGTTILARIATKYLDVSTPYALLFFDMIVVAISLTVIPLDKVLVTVISLYIGT
N315 ILAGGTTAGTTILARIATKYLDVSTPYALLFFDMIVVAISLTVIPLDKVLVTVISLYIGT
NCTC8325 ILAGGTTAGTTILARIATKYLDVSTPYALLFFDMIVVAISLTVIPLDKVLVTVISLYIGT
Newman ILAGGTTAGTTILARIATKYLDVSTPYALLFFDMIVVAISLTVIPLDKVLVTVISLYIGT
USA300_FPR3757 ILAGGTTAGTTILARIATKYLDVSTPYALLFFDMIVVAISLTVIPLDKVLVTVISLYIGT
************************************************************
COL KVMEYVIEGLNTKKAMTIISTNPDKLAKAIDEQIGRGLTILNGHGYYTREEKDVLYVVIS
N315 KVMEYVIEGLNTKKAMTIISTNPDKLAKAIDEQIGRGLTILNGHGYYTREEKDVLYVVIS
NCTC8325 KVMEYVIEGLNTKKAMTIISTNPDKLAKAIDEQIGRGLTILNGHGYYTREEKDVLYVVIS
Newman KVMEYVIEGLNTKKAMTIISTNPDKLAKAIDEQIGRGLTILNGHGYYTREEKDVLYVVIS
USA300_FPR3757 KVMEYVIEGLNTKKAMTIISTNPDKLAKAIDEQIGRGLTILNGHGYYTREEKDVLYVVIS
************************************************************
COL KTQVSKAKRLIKQIDKDAFLVIHDVRDVYGNGFLADE
N315 KTQVSKAKRLIKQIDKDAFLVIHDVRDVYGNGFLADE
NCTC8325 KTQVSKAKRLIKQIDKDAFLVIHDVRDVYGNGFLADE
Newman KTQVSKAKRLIKQIDKDAFLVIHDVRDVYGNGFLADE
USA300_FPR3757 KTQVSKAKRLIKQIDKDAFLVIHDVRDVYGNGFLADE
*************************************