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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002640000
- symbol?: sstD
- synonym:
- description?: transferrin receptor
- transferrin receptor
- ferrichrome ABC transporter lipoprotein
- iron compound ABC transporter, siderophore-binding lipoprotein, putative
- siderophore ABC transporter substrate-binding protein
- Iron compound ABC uptake transporter substrate-binding protein
- periplasmic binding protein
- ABC-type siderophore binding protein
- ferric anguibactin-binding protein
- iron (Fe+3) ABC superfamily ATP binding cassette transporter, binding protein
- iron (Fe+3) ABC transporter binding protein
- lipoprotein
- periplasmic binding family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3140250..3141278
- synteny block?: BlockID0018750
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0714
08BA02176:
C248_0823 (sstD)
11819-97:
MS7_0787
6850:
RSAU_000711
71193:
ST398NM01_0813
ECT-R 2:
ECTR2_687
ED133:
SAOV_0773
ED98:
SAAV_0698
HO 5096 0412:
SAEMRSA15_06620 (sstD)
JH1:
SaurJH1_0777
JH9:
SaurJH9_0760
JKD6008:
SAA6008_00751
JKD6159:
SAA6159_00692
LGA251:
SARLGA251_06690 (sstD)
M013:
M013TW_0722
MRSA252:
SAR0790 (sstD)
MSHR1132:
SAMSHR1132_06810
MSSA476:
SAS0701
Mu3:
SAHV_0733
Mu50:
SAV0736
MW2:
MW0698
RF122:
SAB0688 (sstD)
ST398:
SAPIG0813
T0131:
SAT0131_00808
TCH60:
HMPREF0772_12448 (sstD)
TW20:
SATW20_08110 (sstD)
USA300_TCH1516:
USA300HOU_0762
VC40:
SAVC_03315
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKTVLYLVLAVMFLLAACGNNSDKEQSKSETKGSKDTVKIENNYKMRGEKKDGSDAKKV
N315 MKKTVLYLVLAVMFLLAACGNNSDKEQSKSETKGSKDTVKIENNYKMRGEKKDGSDAKKV
NCTC8325 MKKTVLYLVLAVMFLLAACGNNSDKEQSKSETKGSKDTVKIENNYKMRGEKKDGSDAKKV
Newman MKKTVLYLVLAVMFLLAACGNNSDKEQSKSETKGSKDTVKIENNYKMRGEKKDGSDAKKV
USA300_FPR3757 MKKTVLYLVLAVMFLLAACGNNSDKEQSKSETKGSKDTVKIENNYKMRGEKKDGSDAKKV
************************************************************
COL KETVEVPKNPKNAVVLDYGALDVMKEMGLSDKVKALPKGEGGKSLPNFLESFKDDKYTNV
N315 KETVEVPKNPKNAVVLDYGALDVMKEMGLSDKVKALPKGEGGKSLPNFLESFKDDKYTNV
NCTC8325 KETVEVPKNPKNAVVLDYGALDVMKEMGLSDKVKALPKGEGGKSLPNFLESFKDDKYTNV
Newman KETVEVPKNPKNAVVLDYGALDVMKEMGLSDKVKALPKGEGGKSLPNFLESFKDDKYTNV
USA300_FPR3757 KETVEVPKNPKNAVVLDYGALDVMKEMGLSDKVKALPKGEGGKSLPNFLESFKDDKYTNV
************************************************************
COL GNLKEVNFDKIAATKPEVIFISGRTANQKNLDEFKKAAPKAKIVYVGADEKNLIGSMKQN
N315 GNLKEVNFDKIAATKPEVIFISGRTANQKNLDEFKKAAPKAKIVYVGADEKNLIGSMKQN
NCTC8325 GNLKEVNFDKIAATKPEVIFISGRTANQKNLDEFKKAAPKAKIVYVGADEKNLIGSMKQN
Newman GNLKEVNFDKIAATKPEVIFISGRTANQKNLDEFKKAAPKAKIVYVGADEKNLIGSMKQN
USA300_FPR3757 GNLKEVNFDKIAATKPEVIFISGRTANQKNLDEFKKAAPKAKIVYVGADEKNLIGSMKQN
************************************************************
COL TENIGKIYDKEDKAKELNKDLDNKIASMKDKTKNFNKTVMYLLVNEGELSTFGPKGRFGG
N315 TENIGKIYDKEDKAKELNKDLDNKIASMKDKTKNFNKTVMYLLVNEGELSTFGPKGRFGG
NCTC8325 TENIGKIYDKEDKAKELNKDLDNKIASMKDKTKNFNKTVMYLLVNEGELSTFGPKGRFGG
Newman TENIGKIYDKEDKAKELNKDLDNKIASMKDKTKNFNKTVMYLLVNEGELSTFGPKGRFGG
USA300_FPR3757 TENIGKIYDKEDKAKELNKDLDNKIASMKDKTKNFNKTVMYLLVNEGELSTFGPKGRFGG
************************************************************
COL LVYDTLGFNAVDKKVSNSNHGQNVSNEYVNKENPDVILAMDRGQAISGKSTAKQALNNPV
N315 LVYDTLGFNAVDKKVSNSNHGQNVSNEYVNKENPDVILAMDRGQAISGKSTAKQALNNPV
NCTC8325 LVYDTLGFNAVDKKVSNSNHGQNVSNEYVNKENPDVILAMDRGQAISGKSTAKQALNNPV
Newman LVYDTLGFNAVDKKVSNSNHGQNVSNEYVNKENPDVILAMDRGQAISGKSTAKQALNNPV
USA300_FPR3757 LVYDTLGFNAVDKKVSNSNHGQNVSNEYVNKENPDVILAMDRGQAISGKSTAKQALNNPV
************************************************************
COL LKNVKAIKEDKVYNLDPKLWYFAAGSTTTTIKQIEELDKVVK
N315 LKNVKAIKEDKVYNLDPKLWYFAAGSTTTTIKQIEELDKVVK
NCTC8325 LKNVKAIKEDKVYNLDPKLWYFAAGSTTTTIKQIEELDKVVK
Newman LKNVKAIKEDKVYNLDPKLWYFAAGSTTTTIKQIEELDKVVK
USA300_FPR3757 LKNVKAIKEDKVYNLDPKLWYFAAGSTTTTIKQIEELDKVVK
******************************************