PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002797000
• symbol^?: —
• synonym:
• description^?: anaerobic ribonucleoside-triphosphate reductase activating protein

  descriptions from strain specific annotations:

  • anaerobic ribonucleoside-triphosphate reductase activating protein
  • extracellular matrix and plasma binding protein
  • secreted von Willebrand factor-binding protein
  • von Willebrand binding protein
  • von Willebrand factor-binding VWbp
• strand^?: +
• coordinates^?: 3264197..3264980
• synteny block^?: BlockID0019900
• occurrence^?: in 97% of 33 strains

⊟Orthologs

COL:
SACOL0859
N315:
SA0745
NCTC8325:
SAOUHSC_00817
Newman:
NWMN_0759
USA300_FPR3757:
SAUSA300_0775
04-02981:
SA2981_0769
08BA02176:
C248_0883
11819-97:
MS7_0842 (vwb)
6850:
RSAU_000768
71193:
ST398NM01_0870
ECT-R 2:
ECTR2_742
ED133:
SAOV_0831
ED98:
SAAV_0760
HO 5096 0412:
SAEMRSA15_07170
JH1:
SaurJH1_0831
JH9:
SaurJH9_0815
JKD6008:
SAA6008_00806
JKD6159:
SAA6159_00746
LGA251:
SARLGA251_07220
M013:
M013TW_0781
MRSA252:
SAR0846
MSHR1132:
—
MSSA476:
SAS0755
Mu3:
SAHV_0810
Mu50:
SAV0814
MW2:
MW0768
RF122:
SAB0747
ST398:
SAPIG0870
T0131:
SAT0131_00891
TCH60:
HMPREF0772_12388
TW20:
SATW20_08650
USA300_TCH1516:
USA300HOU_0822
VC40:
SAVC_03600

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKRKVLVLTMGVICATQLWHSNHANALVTES-----------GANDTKQFTEIVSEEKVI
  N315            MKRKVLVLTMGVICATQLWHSNHANALVTESVETNFVVKDSDNKNILQTHTEITTEEKFS
  NCTC8325        MKRKVLVLTMGVICATQLWHSNHANALVTES-----------GANDTKQFTEIVSEEKVI
  Newman          MKRKVLVLTMGVICATQLWHSNHANALVTES-----------GANDTKQFTEIVSEEKVI
  USA300_FPR3757  MKRKVLVLTMGVICATQLWHSNHANALVTES-----------GANDTKQFTEIVSEEKVI
                  *******************************           . *  : .***.:***. 
  
  COL             TVEHAQINIFQSNSNSNLMEFNILT--MGGKSGAMVGYSEIDSSHFTDRDKRVIRRDHVK
  N315            IVEKSQLNKLKALSNDNYIEYDLHTNQTGIKKGWLYGYSEIDSSHFTDRDKRVIRRDHVK
  NCTC8325        TVEHAQINIFQSNSNSNLMEFNILT--MGGKSGAMVGYSEIDSSHFTDRDKRVIRRDHVK
  Newman          TVEHAQINIFQSNSNSNLMEFNILT--MGGKSGAMVGYSEIDSSHFTDRDKRVIRRDHVK
  USA300_FPR3757  TVEHAQINIFQSNSNSNLMEFNILT--MGGKSGAMVGYSEIDSSHFTDRDKRVIRRDHVK
                   **::*:* ::: **.* :*::: *   * *.* : ************************
  
  COL             EAQSLVENYKDTQSADARMKAKQKVNTLSKPHQNYFNKQIDKVYNGLQR----
  N315            EAQSLINDYKDTQSYEDLAKATAKVSTLSQSHQNYLNKQIDKVNNKIEKTEKR
  NCTC8325        EAQSLVENYKDTQSADARMKAKQKVNTLSKPHQNYFNKQIDKVYNGLQR----
  Newman          EAQSLVENYKDTQSADARMKAKQKVNTLSKPHQNYFNKQIDKVYNGLQR----
  USA300_FPR3757  EAQSLVENYKDTQSADARMKAKQKVNTLSKPHQNYFNKQIDKVYNGLQR----
                  *****:::****** :   **. **.***:.****:******* * :::