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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002898000
- symbol?: sufU
- synonym:
- description?: iron-sulfur cluster assembly scaffold protein NifU
- iron-sulfur cluster assembly scaffold protein NifU
- FeS assembly protein NifU/IscU family
- NifU domain-containing protein
- NifU family SUF system FeS assembly protein
- nitrogen fixation protein NifU-like protein
- SUF system NifU family Fe-S cluster assembly protein
- iron-sulfur (Fe-S) cluster formation protein IscU
- Iron-sulfur cluster assembly scaffold protein IscU
- Iscu
- NifU-like protein
- nitrogen fixation protein NifU
- putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2
- SUF system FeS assembly protein, NifU family
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3342964..3343428
- synteny block?: BlockID0020640
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0800 (uscU)
08BA02176:
C248_0914
11819-97:
MS7_0872
6850:
RSAU_000795
71193:
ST398NM01_0900
ECT-R 2:
ECTR2_772
ED133:
SAOV_0862
ED98:
SAAV_0816
HO 5096 0412:
SAEMRSA15_07470
JH1:
SaurJH1_0862
JH9:
SaurJH9_0846
JKD6008:
SAA6008_00867 (iscU)
JKD6159:
SAA6159_00776 (iscU)
LGA251:
SARLGA251_07740
M013:
M013TW_0837
MRSA252:
SAR0879
MSHR1132:
SAMSHR1132_07690
MSSA476:
SAS0787
Mu3:
SAHV_0841
Mu50:
SAV0845
MW2:
MW0798
RF122:
SAB0777
ST398:
SAPIG0900
T0131:
SAT0131_00944
TCH60:
HMPREF0772_12331
TW20:
SATW20_09170
USA300_TCH1516:
USA300HOU_0874 (iscU)
VC40:
SAVC_03760
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNFNNLDQLYRSVIMDHYKNPRNKGVLDNGSMTVDMNNPTCGDRIRLTFDIEDGIIKDAK
N315 MNFNNLDQLYRSVIMDHYKNPRNKGVLDNGSMTVDMNNPTCGDRIRLTFDIEDGIIKDAK
NCTC8325 MNFNNLDQLYRSVIMDHYKNPRNKGVLDNGSMTVDMNNPTCGDRIRLTFDIEDGIIKDAK
Newman MNFNNLDQLYRSVIMDHYKNPRNKGVLDNGSMTVDMNNPTCGDRIRLTFDIEDGIIKDAK
USA300_FPR3757 MNFNNLDQLYRSVIMDHYKNPRNKGVLDNGSMTVDMNNPTCGDRIRLTFDIEDGIIKDAK
************************************************************
COL FEGEGCSISMASASMMTQAVKGHSLGEAMQMSQEFTKMMLGEDYVITEEMGDIEALQGVS
N315 FEGEGCSISMASASMMTQAVKGHSLGEAMQMSQEFTKMMLGEDYVITEEMGDIEALQGVS
NCTC8325 FEGEGCSISMASASMMTQAVKGHSLGEAMQMSQEFTKMMLGEDYVITEEMGDIEALQGVS
Newman FEGEGCSISMASASMMTQAVKGHSLGEAMQMSQEFTKMMLGEDYVITEEMGDIEALQGVS
USA300_FPR3757 FEGEGCSISMASASMMTQAVKGHSLGEAMQMSQEFTKMMLGEDYVITEEMGDIEALQGVS
************************************************************
COL QFPARIKCATLAWKALEKGTVAKEGKAEGTTEEE
N315 QFPARIKCATLAWKALEKGTVAKEGKAEGTTEEE
NCTC8325 QFPARIKCATLAWKALEKGTVAKEGKAEGTTEEE
Newman QFPARIKCATLAWKALEKGTVAKEGKAEGTTEEE
USA300_FPR3757 QFPARIKCATLAWKALEKGTVAKEGKAEGTTEEE
**********************************