PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003050000
• symbol^?: mnhD1
• synonym:
• description^?: Na+/H+ antiporter subunit D

  descriptions from strain specific annotations:

  • Na+/H+ antiporter subunit D
  • monovalent cation/H+ antiporter subunit D
  • putative monovalent cation/H+ antiporter subunit D
  • CPA3 family monovalent cation (K+ or Na+):proton (H+) antiporter-3 MnhD subunit
  • CPA3 family monovalent cation:proton (H+) antiporter-3 subunit D
  • monovalent cation antiporter-3 subunit D, MnhD
  • multicomponent K+:H+antiporter family protein
  • Na(+)/H(+) antiporter subunit D
  • Na(+)/H(+) antiporter subunit D (Multiple resistance and pHhomeostasis protein D) (Mrp complex subunit D)
  • Na(+)/H(+) antiporter subunit D1
  • Na(+) H(+) antiporter subunit D
  • Na+/H+ antiporter subunit
  • ShaD
• strand^?: -
• coordinates^?: 3439414..3440910
• synteny block^?: BlockID0021580
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0952 (mnhD)
N315:
SA0810 (mnhD)
NCTC8325:
SAOUHSC_00886
Newman:
NWMN_0819 (mnhD)
USA300_FPR3757:
SAUSA300_0852 (mnhD)
04-02981:
SA2981_0904 (mnhD)
08BA02176:
C248_0948 (mnhD)
11819-97:
MS7_0904 (mrpD)
6850:
RSAU_000826 (mnhD2)
71193:
ST398NM01_0932
ECT-R 2:
ECTR2_805 (phaD)
ED133:
SAOV_0895c
ED98:
SAAV_0910 (mnhD)
HO 5096 0412:
SAEMRSA15_07790 (mnhD)
JH1:
SaurJH1_0968
JH9:
SaurJH9_0949
JKD6008:
SAA6008_00902 (mnhD)
JKD6159:
SAA6159_00808 (mnhD)
LGA251:
SARLGA251_08670 (mnhD)
M013:
M013TW_0868
MRSA252:
SAR0911 (mnhD)
MSHR1132:
SAMSHR1132_08010
MSSA476:
SAS0819
Mu3:
SAHV_0944 (mnhD)
Mu50:
SAV0949 (mnhD)
MW2:
MW0831 (mnhD)
RF122:
SAB0816c (mnhD)
ST398:
SAPIG0932
T0131:
SAT0131_00981
TCH60:
HMPREF0772_12298 (mnhD)
TW20:
SATW20_09490 (mnhD)
USA300_TCH1516:
USA300HOU_0909 (mnhD2)
VC40:
SAVC_03920

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MIESNMLVLTLVIPVITAILLVFIGKRPIIKRYVALGGTLLTLVAAIINLANVVKHGPIR
  N315            MIESNMLVLTLVIPVITAILLVFIGKRPIIKRYVALGGTLLTLVAAIINLANVVKHGPIR
  NCTC8325        MIESNMLVLTLVIPVITAILLVFIGKRPIIKRYVALGGTLLTLVAAIINLANVVKHGPIR
  Newman          MIESNMLVLTLVIPVITAILLVFIGKRPIIKRYVALGGTLLTLVAAIINLANVVKHGPIR
  USA300_FPR3757  MIESNMLVLTLVIPVITAILLVFIGKRPIIKRYVALGGTLLTLVAAIINLANVVKHGPIR
                  ************************************************************
  
  COL             VELGSWKAPYSIVFVLDIFSALLIITSIIITAIVILYSSQTIGIERERYYYYFSVLFMLI
  N315            VELGSWKAPYSIVFVLDIFSALLIITSIIITAIVILYSYQTIGIERERYYYYFSVLFMLI
  NCTC8325        VELGSWKAPYSIVFVLDIFSALLIITSIIITAIVILYSYQTIGIERERYYYYFSVLFMLI
  Newman          VELGSWKAPYSIVFVLDIFSALLIITSIIITAIVILYSYQTIGIERERYYYYFSVLFMLI
  USA300_FPR3757  VELGSWKAPYSIVFVLDIFSALLIITSIIITAIVILYSYQTIGIERERYYYYFSVLFMLI
                  ************************************** *********************
  
  COL             GIIGAFTTGDIFNLFVFFEVFLMSSYFLLVIGSTKIQLQETIKYVLVNVVSSSFFVMGVA
  N315            GIIGAFTTGDIFNLFVFFEVFLMSSYFLLVIGSTKIQLQETIKYVLVNVVSSSFFVMGVA
  NCTC8325        GIIGAFTTGDIFNLFVFFEVFLMSSYFLLVIGSTKIQLQETIKYVLVNVVSSSFFVMGVA
  Newman          GIIGAFTTGDIFNLFVFFEVFLMSSYFLLVIGSTKIQLQETIKYVLVNVVSSSFFVMGVA
  USA300_FPR3757  GIIGAFTTGDIFNLFVYFEVFLMSSYFLLVIGSTKIQLQETIKYVLVNVVSSSFFVMGVA
                  ****************:*******************************************
  
  COL             ILYSVVGTLNLADISNKLANLSAHDSGLVNIVFILFIFVFATKAGVFPMFVWLPSAYYAP
  N315            ILYSVVGTLNLADISNKLANLSAHDSGLVNIVFILFIFVFATKAGVFPMFVWLPSAYYAP
  NCTC8325        ILYSVVGTLNLADISNKLANLSAHDSGLVNIVFILFIFVFATKAGVFPMFVWLPSAYYAP
  Newman          ILYSVVGTLNLADISNKLANLSAHDSGLVNIVFILFIFVFATKAGVFPMFVWLPSAYYAP
  USA300_FPR3757  ILYSVVGTLNLADISNKLANLSAHDSGLVNIVFILFIFVFATKAGVFPMFVWLPSAYYAP
                  ************************************************************
  
  COL             PIPIIAFFGALLTKVGVYAIARTLSLFFSDNVSFSHYVILFLALLTIIFGCVGAVAYANI
  N315            PIPIIAFFGALLTKVGVYAIARTLSLFFSDNVSFSHYVILFLALLTIIFGCVGAVAYANI
  NCTC8325        PIPIIAFFGALLTKVGVYAIARTLSLFFSDNVSFSHYVILFLALLTIIFGCVGAVAYANI
  Newman          PIPIIAFFGALLTKVGVYAIARTLSLFFSDNVSFSHYVILFLALLTIIFGCVGAVAYANI
  USA300_FPR3757  PIPIIAFFGALLTKVGVYAIARTLSLFFSDNVSFSHYVILFLALLTIIFGCVGAVAYANI
                  ************************************************************
  
  COL             KKIILYNVMIAVGVILVGVAMMTESGMIGAIYYTLHDMLVKLALFLLIGIMIKITGTADL
  N315            KKIILYNVMIAVGVILVGVAMMTESGMIGAIYYTLHDMLVKLALFLLIGIMIKITGTADL
  NCTC8325        KKIILYNVMIAVGVILVGVAMMTESGMIGAIYYTLHDMLVKLALFLLIGIMIKITGTADL
  Newman          KKIILYNVMIAVGVILVGVAMMTESGMIGAIYYTLHDMLVKLALFLLIGIMIKITGTADL
  USA300_FPR3757  KKIILYNVMIAVGVILVGVAMMTESGMIGAIYYTLHDMLVKLALFLLIGIMIKITGTADL
                  ************************************************************
  
  COL             RQFGGLIKRYPVLGWSFFIAALSLAGIPPLSGFYGKFFIVQSTFERGFYLSGVIVLLSSL
  N315            RQFGGLIKRYPVLGWSFFIAALSLAGIPPLSGFYGKFFIVQSTFERGFYLSGVIVLLSSL
  NCTC8325        RQFGGLIKRYPVLGWSFFIAALSLAGIPPLSGFYGKFFIVQSTFERGFYLSGVIVLLSSL
  Newman          RQFGGLIKRYPVLGWSFFIAALSLAGIPPLSGFYGKFFIVQSTFERGFYLSGVIVLLSSL
  USA300_FPR3757  RQFGGLIKRYPVLGWSFFIAALSLAGIPPLSGFYGKFFIVQSTFERGFYLSGVIVLLSSL
                  ************************************************************
  
  COL             VVLYSVIRIFLQGFFGQPKGYDLNNKVDVKYLTTIAIVAVVITVLYGLSADYLYPMVKAG
  N315            VVLYSVIRIFLQGFFGQPKGYDLNNKVDVKYLTTIAIVAVVITVLYGLSADYLYPMVKAG
  NCTC8325        VVLYSVIRIFLQGFFGQPKGYDLNNKVDVKYLTTIAIVAVVITVLYGLSADYLYPMVKAG
  Newman          VVLYSVIRIFLQGFFGQPKGYDLNNKVDVKYLTTIAIVAVVITVLYGLSADYLYPMVKAG
  USA300_FPR3757  VVLYSVIRIFLQGFFGQPKGYDLNNKVDVKYLTTIAIVAVVITVLYGLSADYLYPMVKAG
                  ************************************************************
  
  COL             AETFYNPSTYVKAVLGGK
  N315            AETFYNPSTYVKAVLGGK
  NCTC8325        AETFYNPSTYVKAVLGGK
  Newman          AETFYNPSTYVKAVLGGK
  USA300_FPR3757  AETFYNPSTYVKAVLGGK
                  ******************