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Summary[edit | edit source]

  • pan ID?: SAUPAN003224000
  • symbol?:
  • synonym:
  • description?: putative DUF1093-containing protein

      descriptions from strain specific annotations:

    • putative DUF1093-containing protein
    • YxeA family protein
    • exported protein
  • strand?: +
  • coordinates?: 3607456..3607776
  • synteny block?: BlockID0023100
  • occurrence?: in 97% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0987
    08BA02176:
    C248_1057
    11819-97:
    MS7_0989
    6850:
    RSAU_000924
    71193:
    ST398NM01_1030
    ECT-R 2:
    ECTR2_888
    ED133:
    SAOV_0978
    ED98:
    SAAV_0996
    HO 5096 0412:
    SAEMRSA15_08630
    JH1:
    SaurJH1_1114
    JH9:
    SaurJH9_1092
    JKD6008:
    SAA6008_00986
    JKD6159:
    SAA6159_00888
    LGA251:
    SARLGA251_09470
    M013:
    M013TW_0962
    MRSA252:
    SAR1003
    MSHR1132:
    SAMSHR1132_08800
    MSSA476:
    SAS0967
    Mu3:
    SAHV_1027
    Mu50:
    SAV1034
    MW2:
    MW0915
    RF122:
    SAB0897
    ST398:
    SAPIG1030
    T0131:
    SAT0131_01066
    TCH60:
    HMPREF0772_12203
    TW20:
    SATW20_10290
    USA300_TCH1516:
    VC40:
    SAVC_04325

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MKFIIAILLGLILSITIAFTIIHHPILDRFNPFLKTEYSYAKVPKGTQQYVNITAYSERG
    N315            MKFIIAILLGLIVSITIAFTIIHHPILDRFNPFLKTEYSYAKVPKGTQQYVNITAYSERG
    NCTC8325        MKFIIAILLGLILSITIAFTIIHHPILDRFNPFLKTEYSYAKVPKGTQQYVNITAYSERG
    Newman          MKFIIAILLGLILSITIAFTIIHHPILDRFNPFLKTEYSYAKVPKGTQQYVNITAYSERG
    USA300_FPR3757  MKFIIAILLGLILSITIAFTIIHHPILDRFNPFLKTEYSYAKVPKGTQQYVNITAYSERG
                    ************:***********************************************

    COL             EKLDYKLTFNGFSPSRTYVEIKHKGQYVISITYVEKEDTPKEVRQE
    N315            EKLDYKLTFNGFSPSRTYVEIKHKGQYVISITYVEKEDIPKEVRQE
    NCTC8325        EKLDYKLTFNGFSPSRTYVEIKHKGQYVISITYVEKEDTPKEVRQE
    Newman          EKLDYKLTFNGFSPSRTYVEIKHKGQYVISITYVEKEDTPKEVRQE
    USA300_FPR3757  EKLDYKLTFNGFSPSRTYVEIKHKGQYVISITYVEKEDTPKEVRQE
                    ************************************** *******