Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN003299000
- symbol?: —
- synonym:
- description?: membrane protein
- membrane protein
- membrane spanning protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3670015..3671319
- synteny block?: BlockID0023830
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1036
08BA02176:
C248_1105
11819-97:
MS7_1037
6850:
RSAU_000966
71193:
ST398NM01_1077
ECT-R 2:
ECTR2_935
ED133:
SAOV_1024
ED98:
SAAV_1045
HO 5096 0412:
SAEMRSA15_09100
JH1:
SaurJH1_1161
JH9:
SaurJH9_1140
JKD6008:
SAA6008_01035
JKD6159:
SAA6159_00936
LGA251:
SARLGA251_09930
M013:
M013TW_1012
MRSA252:
SAR1053
MSHR1132:
SAMSHR1132_09270
MSSA476:
SAS1015
Mu3:
SAHV_1072
Mu50:
SAV1080
MW2:
MW0962
RF122:
SAB0945
ST398:
SAPIG1077
T0131:
SAT0131_01116
TCH60:
HMPREF0772_12154
TW20:
SATW20_10750
USA300_TCH1516:
USA300HOU_1022
VC40:
SAVC_04560
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSFLRKHAEIIFSYLIGIVSLFTGLIILINLPLIKQLNGGKKVDTHVHNVWEFLNAFFSE
N315 MSFLRKHAEIIFSYLIGIVSLFTGLIILINLPLIKQLNGGKKVDTHVHNVWEFLNAFFSE
NCTC8325 MSFLRKHAEIIFSYLIGIVSLFTGLIILINLPLIKQLNGGKKVDTHVHNVWEFLNAFFSE
Newman MSFLRKHAEIIFSYLIGIVSLFTGLIILINLPLIKQLNGGKKVDTHVHNVWEFLNAFFSE
USA300_FPR3757 MSFLRKHAEIIFSYLIGIVSLFTGLIILINLPLIKQLNGGKKVDTHVHNVWEFLNAFFSE
************************************************************
COL IIKVMSRFIGNFPIVSAIVIIIFGILVMLIGHTLLRTIKYDYDISIFFLVIGIMYFIITL
N315 IIKVMSRFIGNFPIVSAIVIIIFGILVMLIGHTLLRTIKYDYDISIFFLVIGIMYFIITL
NCTC8325 IIKVMSRFIGNFPIVSAIVIIIFGILVMLIGHTLLRTIKYDYDISIFFLVIGIMYFIITL
Newman IIKVMSRFIGNFPIVSAIVIIIFGILVMLIGHTLLRTIKYDYDISIFFLVIGIMYFIITL
USA300_FPR3757 IIKVMSRFIGDFPIVSAIVIIIFGILVMLIGHTLLRTIKYDYDISIFFLVIGIMYFIITL
**********:*************************************************
COL ILMTQVYGFFAVIFIIPFTIHIGYIVYKDELNQENVKNHFMWIIVSYGISYLITQIALYG
N315 ILMTQVYGFFAVIFIIPFTIHIGYIVYKDELNQENVKNHFMWIIVSYGISYLITQIALYG
NCTC8325 ILMTQVYGFFAVIFIIPFTIHIGYIVYKDELNQENVKNHFMWIIVSYGISYLITQIALYG
Newman ILMTQVYGFFAVIFIIPFTIHIGYIVYKDELNQENVKNHFMWIIVSYGISYLITQIALYG
USA300_FPR3757 ILMTQVYGFFAVIFIIPFTIHIGYIVYKDELNQENVKNHFMWIIVSYGISYLITQIALYG
************************************************************
COL RIDANEIESIDILSVNAFFIIMWLLGQMAIWNFLFLRRALPLTKQELGEEEPELSRTSKG
N315 RIDANEIESIDILSVNAFFIIMWLLGQMAIWNFLFLRRALPLTKQELGEEEPELSRTSKG
NCTC8325 RIDANEIESIDILSVNAFFIIMWLLGQMAIWNFLFLRRALPLTKQELGEEEPELSRTSKG
Newman RIDANEIESIDILSVNAFFIIMWLLGQMAIWNFLFLRRALPLTKQELGEEEPELSRTSKG
USA300_FPR3757 RIDANEIESIDILSVNAFFIIMWLLGQMAIWNFLFLRRALPLTKQELGEEEPELSRTSKG
************************************************************
COL NVTNQTKIHLKQLQDKTTEYARKTRRSVDLDKIRAKRDKFKKKVNDIIDIQEDDIPDWMR
N315 NVTNQTKIHLKQLQDKTTEYARKTRRSVDLDKIRAKRDKFKKKVNDIIDIQEDDIPDWMR
NCTC8325 NVTNQTKIHLKQLQDKTTEYARKTRRSVDLDKIRAKRDKFKKKVNDIIDIQEDDIPDWMR
Newman NVTNQTKIHLKQLQDKTTEYARKTRRSVDLDKIRAKRDKFKKKVNDIIDIQEDDIPDWMR
USA300_FPR3757 NVTNQTKIHLKQLQDKTTEYARKTRRSVDLDKIRAKRDKFKKKVNDIIDIQEDDIPDWMR
************************************************************
COL KPKWVKPMYVELFCGVVIFLFTFLEFNNRNALFVSGDWKLSQTQYVIEWVTLLILLFIII
N315 KPKWVKPMYVELFCGVVIFLFTFLEFNNRNALFVSGDWKLSQTQYVIEWVTLLILLFIII
NCTC8325 KPKWVKPMYVELFCGVVIFLFTFLEFNNRNALFVSGDWKLSQTQYVIEWVTLLILLFIII
Newman KPKWVKPMYVELFCGVVIFLFTFLEFNNRNALFVSGDWKLSQTQYVIEWVTLLILLFIII
USA300_FPR3757 KPKWVKPMYVELFCGVVIFLFTFLEFNNRNALFVSGDWKLSQTQYVIEWVTLLILLFIII
************************************************************
COL AYIATTLTFHLKGKFYYLQLFMGSILFFKLLTEFINIMIHGLLLSVFITPTLLLMLLAII
N315 AYIATTLTFHLKGKFYYLQLFMGSILFFKLLTEFINIMIHGLLLSVFITPTLLLMLLAII
NCTC8325 AYIATTLTFHLKGKFYYLQLFMGSILFFKLLTEFINIMIHGLLLSVFITPTLLLMLLAII
Newman AYIATTLTFHLKGKFYYLQLFMGSILFFKLLTEFINIMIHGLLLSVFITPTLLLMLLAII
USA300_FPR3757 AYIATTLTFHLKGKFYYLQLFMGSILFFKLLTEFINIMIHGLLLSVFITPTLLLMLLAII
************************************************************
COL ISYSLQLRERP
N315 ISYSLQLRERP
NCTC8325 ISYSLQLRERP
Newman ISYSLQLRERP
USA300_FPR3757 ISYSLQLRERP
***********