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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003426000
- symbol?: ssl12
- synonym:
- description?: staphylococcal superantigen-like protein 12
- staphylococcal superantigen-like protein 12
- superantigen-like protein
- superantigen-like protein SSL12
- exotoxin
- staphylococcal/Streptococcal toxin, beta-grasp domain protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3775445..3776161
- synteny block?: BlockID0025070
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1122
08BA02176:
C248_1192
11819-97:
MS7_1121
6850:
RSAU_001046
71193:
ST398NM01_1160
ECT-R 2:
ECTR2_1020
ED133:
SAOV_1164c
ED98:
SAAV_1134
HO 5096 0412:
SAEMRSA15_09970
JH1:
SaurJH1_1249
JH9:
SaurJH9_1224
JKD6008:
SAA6008_01118
JKD6159:
SAA6159_01016
LGA251:
SARLGA251_10750
M013:
M013TW_1097
MRSA252:
SAR1139
MSHR1132:
SAMSHR1132_10070
MSSA476:
SAS1099
Mu3:
SAHV_1156
Mu50:
SAV1166
MW2:
MW1047
RF122:
SAB1030c
ST398:
SAPIG1160
T0131:
SAT0131_01209
TCH60:
HMPREF0772_12068
TW20:
SATW20_11580
USA300_TCH1516:
USA300HOU_1103
VC40:
SAVC_04980
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSKNITKNIILTTTLLLLGTVLPQNQKPVFSFYSEAKAYSIGQDETNINELIKYYTQPHF
N315 MSKNITKNIILTTTLLLLGTVLPQNQKPVFSFYSEAKAYSIGQDETNINELIKYYTQPHF
NCTC8325 MSKNITKNIILTTTLLLLGTVLPQNQKPVFSFYSEAKAYSIGQDETNINELIKYYTQPHF
Newman MSKNITKNIILTTTLLLLGTVLPQNQKPVFSFYSEAKAYSIGQDETNINELIKYYTQPHF
USA300_FPR3757 MSKNITKNIILTTTLLLLGTVLPQNQKPVFSFYSEAKAYSIGQDETNINELIKYYTQPHF
************************************************************
COL SFSNKWLYQYDNGNIYVELKRYSWSAHISLWGAESWGNINQLKDRYVDVFGLKDKDTDQL
N315 SFSNKWLYQYDNGNIYVELKRYSWSAHISLWGAESWGNINQLKDRYVDVFGLKDKDTDQL
NCTC8325 SFSNKWLYQYDNGNIYVELKRYSWSAHISLWGAESWGNINQLKDRYVDVFGLKDKDTDQL
Newman SFSNKWLYQYDNGNIYVELKRYSWSAHISLWGAESWGNINQLKDRYVDVFGLKDKDTDQL
USA300_FPR3757 SFSNKWLYQYDNGNIYVELKRYSWSAHISLWGAESWGNINQLKDRYVDVFGLKDKDTDQL
************************************************************
COL WWSYRETFTGGVTPAAKPSDKTYNLFVQYKDKLQTIIGAHKIYQGNKPVLTLKEIDFRAR
N315 WWSYRETFTGGVTPAAKPSDKTYNLFVQYKDKLQTIIGAHKIYQGNKPVLTLKEIDFRAR
NCTC8325 WWSYRETFTGGVTPAAKPSDKTYNLFVQYKDKLQTIIGAHKIYQGNKPVLTLKEIDFRAR
Newman WWSYRETFTGGVTPAAKPSDKTYNLFVQYKDKLQTIIGAHKIYQGNKPVLTLKEIDFRAR
USA300_FPR3757 WWSYRETFTGGVTPAAKPSDKTYNLFVQYKDKLQTIIGAHKIYQGNKPVLTLKEIDFRAR
************************************************************
COL EALIKNKILYNENRNKGKLKITGGGNNYTIDLSKRLHSDLANVYVKNPNKITVDVLFD
N315 EALIKNKILYTENRNKGKLKITGGGNNYTIDLSKRLHSDLANVYVKNPNKITVDVLFD
NCTC8325 EALIKNKILYNENRNKGKLKITGGGNNYTIDLSKRLHSDLANVYVKNPNKITVDVLFD
Newman EALIKNKILYNENRNKGKLKITGGGNNYTIDLSKRLHSDLANVYVKNPNKITVDVLFD
USA300_FPR3757 EALIKNKILYNENRNKGKLKITGGGNNYTIDLSKRLHSDLANVYVKNPNKITVDVLFD
**********.***********************************************