PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003488000
• symbol^?: —
• synonym:
• description^?: VOC family protein

  descriptions from strain specific annotations:

  • VOC family protein
  • PhnB-like protein
  • 3-demethylubiquinone-9 3-methyltransferase
  • glyoxalase
  • PhnB protein
• strand^?: +
• coordinates^?: 3828130..3828531
• synteny block^?: BlockID0025670
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1219
N315:
SA1050
NCTC8325:
SAOUHSC_01174
Newman:
NWMN_1118
USA300_FPR3757:
SAUSA300_1100
04-02981:
SA2981_1165
08BA02176:
C248_1236
11819-97:
MS7_1164
6850:
RSAU_001089
71193:
ST398NM01_1204
ECT-R 2:
ECTR2_1062
ED133:
SAOV_1210
ED98:
SAAV_1178
HO 5096 0412:
SAEMRSA15_10400
JH1:
SaurJH1_1291
JH9:
SaurJH9_1266
JKD6008:
SAA6008_01161
JKD6159:
SAA6159_01060
LGA251:
SARLGA251_11180
M013:
M013TW_1144
MRSA252:
SAR1183
MSHR1132:
SAMSHR1132_10480
MSSA476:
SAS1141
Mu3:
SAHV_1197
Mu50:
SAV1207
MW2:
MW1090
RF122:
SAB1071
ST398:
SAPIG1204
T0131:
SAT0131_01255 (moaD)
TCH60:
HMPREF0772_12025
TW20:
SATW20_12010
USA300_TCH1516:
USA300HOU_1145
VC40:
SAVC_05200

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MDIPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQV
  N315            MDIPKITTFLMFNNKAEEAVKLYTSLFEDSEIITMAKYGENGPGDHGTVQHSIFTLNGQV
  NCTC8325        MDIPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQV
  Newman          MDIPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQV
  USA300_FPR3757  MDIPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQV
                  **************:****************************** **************
  
  COL             FMAIDANSGTELPMNPAISLFVTVKDTIEMERLFNGLKDEGAILMPKTNMPPYREFAWVQ
  N315            FMAIDANSGTELPMNPAISLFVTVKDTIEMERLFNGLKDEGAILMPKTNMPPYREFAWVQ
  NCTC8325        FMAIDANSGTELPMNPAISLFVTVKDTIEMERLFNGLKDEGAILMPKTNMPPYREFAWVQ
  Newman          FMAIDANSGTELPMNPAISLFVTVKDTIEMERLFNGLKDEGAILMPKTNMPPYREFAWVQ
  USA300_FPR3757  FMAIDANSGTELPMNPAISLFVTVKDTIEMERLFNGLKDEGAILMPKTNMPPYREFAWVQ
                  ************************************************************
  
  COL             DKFGVSFQLALPE
  N315            DKFGVSFQLALPE
  NCTC8325        DKFGVSFQLALPE
  Newman          DKFGVSFQLALPE
  USA300_FPR3757  DKFGVSFQLALPE
                  *************