PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003542000
• symbol^?: fmhC
• synonym:
• description^?: aminoacyltransferase

  descriptions from strain specific annotations:

  • aminoacyltransferase
  • endopeptidase resistance gene
  • endopeptidase resistance protein
  • endopeptidase resistance protein FmhC
  • FemA/FemB family glycyltransferase FmhC
  • FmhC protein
  • methicillin resistance-related protein FmhC
  • femAB family protein
  • methicillin resistance protein
  • FemAB family peptidoglycan biosynthesis protein
  • FmhC protein of FemAB family
  • pseudogene
• strand^?: +
• coordinates^?: 3879858..3880515
• synteny block^?: BlockID0026190
• occurrence^?: in 91% of 33 strains

⊟Orthologs

COL:
SACOL1265 (eprH)
N315:
SA1091 (fmhC)
NCTC8325:
SAOUHSC_01220
Newman:
NWMN_1158 (fmhC)
USA300_FPR3757:
SAUSA300_1141
04-02981:
SA2981_1206 (fmhC)
08BA02176:
C248_1279 (fmhC)
11819-97:
MS7_1206
6850:
RSAU_001130
71193:
—
ECT-R 2:
ECTR2_1104
ED133:
SAOV_1250
ED98:
SAAV_1222 (eprH)
HO 5096 0412:
SAEMRSA15_10810 (fmhC)
JH1:
SaurJH1_1332
JH9:
SaurJH9_1307
JKD6008:
SAA6008_01203 (fmhC)
JKD6159:
SAA6159_01103 (fmhC)
LGA251:
SARLGA251_11590 (fmhC)
M013:
M013TW_1186
MRSA252:
SAR1224 (fmhC)
MSHR1132:
SAMSHR1132_10910
MSSA476:
SAS1182
Mu3:
SAHV_1238 (fmhC)
Mu50:
SAV1248 (fmhC(eprh))
MW2:
MW1131 (fmhC)
RF122:
—
ST398:
—
T0131:
SAT0131_01298
TCH60:
HMPREF0772_11983 (eprH)
TW20:
SATW20_12420 (fmhC)
USA300_TCH1516:
USA300HOU_1179 (fmhC)
VC40:
SAVC_05405

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKFSTLSEEEFTNYTKKHFKHYTQSIELYNYRNKINHEAHIVGVKNDKNEVIAACLLTEA
  N315            MKFSTLSEEEFTNYTKKHFKHYTQSIELYNYRNKINHEAHIVGVKNDKNEVIAACLLTEA
  NCTC8325        MKFSTLSEEEFTNYTKKHFKHYTQSIELYNYRNKINHEAHIVGVKNDKNEVIAACLLTEA
  Newman          MKFSTLSEEEFTNYTKKHFKHYTQSIELYNYRNKINHEAHIVGVKNDKNEVIAACLLTEA
  USA300_FPR3757  MKFSTLSEEEFTNYTKKHFKHYTQSIELYNYRNKINHEAHIVGVKNDKNEVIAACLLTEA
                  ************************************************************
  
  COL             RIFKFYKYFYSHRGPLLDYFDAKLVCYFFKELSKFIYKNRGVFILVDPYLIENLRDANGR
  N315            RIFKFYKYFYSHRGPLLDYFDAKLVCYFFKELSKFIYKNRGVFILVDPYLIENLRDANGR
  NCTC8325        RIFKFYKYFYSHRGPLLDYFDAKLVCYFFKELSKFIYKNRGVFILVDPYLIENLRDANGR
  Newman          RIFKFYKYFYSHRGPLLDYFDAKLVCYFFKELSKFIYKNRGVFILVDPYLIENLRDANGR
  USA300_FPR3757  RIFKFYKYFYSHRGPLLDYFDAKLVCYFFKELSKFIYKNRGVFILVDPYLIENLRDANGR
                  ************************************************************
  
  COL             IIKNYNNSVIVKMLGKIGYLHQGYTTGYSNKSQIRWISVLDLKDKDENQLLKEMEYQTRR
  N315            IIKNYNNSVIVKMLGKIGYLHQGYTTGYSNKSQIRWISVLDLKDKDENQLLKEMEYQTRR
  NCTC8325        IIKNYNNSVIVKMLGKIGYLHQGYTTGYSNKSQIRWISVLDLKDKDENQLLKEMEYQTRR
  Newman          IIKNYNNSVIVKMLGKIGYLHQGYTTGYSNKSQIRWISVLDLKDKDENQLLKEMEYQTRR
  USA300_FPR3757  IIKNYNNSVIVKMLGKIGYLHQGYTTGYSNKSQIRWISVLDLKDKDENQLLKEMEYQTRR
                  ************************************************************
  
  COL             NIKKTIEIGVKVEDLSIEETNRFYKLFQMAEEKHGFHFMNEDYFKRMQEIYKDKAMLKIA
  N315            NIKKTIEIGVKVEDLSIEETNRFYKLFQMAEEKHGFHFMNEDYFKRMQEIYKDKAMLKIA
  NCTC8325        NIKKTIEIGVKVEDLSIEETNRFYKLFQMAEEKHGFHFMNEDYFKRMQEIYKDKAMLKIA
  Newman          NIKKTIEIGVKVEDLSIEETNRFYKLFQMAEEKHGFHFMNEDYFKRMQEIYKDKAMLKIA
  USA300_FPR3757  NIKKTIEIGVKVEDLSIEETNRFYKLFQMAEEKHGFHFMNEDYFKRMQEIYKDKAMLKIA
                  ************************************************************
  
  COL             CINLNEYQDKLKIQLLKIENEMMTVNRALNENPNSKKNKSKLNQLNMQLSSINNRISKTE
  N315            CINLNEYQDKLKIQLLKIENEMMTVNRALNENPNSKKNKSKLNQLNMQLSSINNRISKTE
  NCTC8325        CINLNEYQDKLKIQLLKIENEMMTVNRALNENPNSKKNKSKLNQLNMQLSSINNRISKTE
  Newman          CINLNEYQDKLKIQLLKIENEMMTVNRALNENPNSKKNKSKLNQLNMQLSSINNRISKTE
  USA300_FPR3757  CINLNEYQDKLKIQLLKIENEMMTVNRALNENPNSKKNKSKLNQLNMQLSSINNRISKTE
                  ************************************************************
  
  COL             ELIFEDGPVLDLAAALFICTDDEVYYLSSGSNPKYNQYMGAYHLQWHMIKYAKSHNINRY
  N315            ELILEDGPVLDLAAALFICTDDEVYYLSSGSNPKYNQYMGAYHLQWHMIKYAKSHNINRY
  NCTC8325        ELIFEDGPVLDLAAALFICTDDEVYYLSSGSNPKYNQYMGAYHLQWHMIKYAKSHNINRY
  Newman          ELIFEDGPVLDLAAALFICTDDEVYYLSSGSNPKYNQYMGAYHLQWHMIKYAKSHNINRY
  USA300_FPR3757  ELIFEDGPVLDLAAALFICTDDEVYYLSSGSNPKYNQYMGAYHLQWHMIKYAKSHNINRY
                  ***:********************************************************
  
  COL             NFYGITGVFSNEADDFGVQQFKKGFNAHVEELIGDFIKPVRPILYKFAKLIYKV
  N315            NFYGITGVFSNEADDFGVQQFKKGFNAHVEELIGDFIKPVRPILYKFAKLIYKV
  NCTC8325        NFYGITGVFSNEADDFGVQQFKKGFNAHVEELIGDFIKPVRPILYKFAKLIYKV
  Newman          NFYGITGVFSNEADDFGVQQFKKGFNAHVEELIGDFIKPVRPILYKFAKLIYKV
  USA300_FPR3757  NFYGITGVFSNEADDFGVQQFKKGFNAHVEELIGDFIKPVRPILYKFAKLIYKV
                  ******************************************************