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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003683000
- symbol?: cls1
- synonym:
- description?: cardiolipin synthase
- cardiolipin synthase
- cardiolipin synthetase
- phospholipase
- type 1 cardiolipin synthetase 1
- phospholipase D/transphosphatidylase
- Cardiolipin synthase 1
- cardiolipin synthetase (Cardiolipin synthase) (CLsynthase)
- cardiolipin synthetase-like protein
- putative cardiolipin synthase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3991512..3993032
- synteny block?: BlockID0027490
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1273
08BA02176:
C248_1356
11819-97:
MS7_1281
6850:
RSAU_001205 (cls1)
71193:
ST398NM01_1324
ECT-R 2:
ECTR2_1177
ED133:
SAOV_1331
ED98:
SAAV_1297
HO 5096 0412:
SAEMRSA15_11650
JH1:
SaurJH1_1406
JH9:
SaurJH9_1379
JKD6008:
SAA6008_01282 (cls1)
JKD6159:
SAA6159_01185 (cls1)
LGA251:
SARLGA251_12310
M013:
M013TW_1270
MRSA252:
SAR1328
MSHR1132:
SAMSHR1132_11630
MSSA476:
SAS1258
Mu3:
SAHV_1306
Mu50:
SAV1317
MW2:
MW1205
RF122:
SAB1180
ST398:
SAPIG1324
T0131:
SAT0131_01385
TCH60:
HMPREF0772_11890 (cls2)
TW20:
SATW20_13200
USA300_TCH1516:
USA300HOU_1262 (cls)
VC40:
SAVC_05830
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ------------MRFTFSNDLGTLFTIILAIGFIINLVLAFIIIFLERNRRTASSTWAWL
N315 MFFVPFFIGEKTMRYTFSNDLGTLFTIILAIGFIINLVLAFIIIFLERNRRTASSTWAWL
NCTC8325 ------------MRFTFSNDLGTLFTIILAIGFIINLVLAFIIIFLERNRRTASSTWAWL
Newman ---MPFFIGEKTMRFTFSNDLGTLFTIILAIGFIINLVLAFIIIFLERNRRTASSTWAWL
USA300_FPR3757 ------------MRFTFSNDLGTLFTIILAIGFIINLVLAFIIIFLERNRRTASSTWAWL
**:*********************************************
COL FVLFVLPLIGFILYLFFGRTVSARKLNKNNGNVLTDFDGLLKQQIESFDKGNYGTDNKQV
N315 FVLFVLPLIGFILYLFFGRTVSARKLNKNNGNVLTDFDGLLKQQIESFDKGNYGTDNKQV
NCTC8325 FVLFVLPLIGFILYLFFGRTVSARKLNKNNGNVLTDFDGLLKQQIESFDKGNYGTDNKQV
Newman FVLFVLPLIGFILYLFFGRTVSARKLNKNNGNVLTDFDGLLKQQIESFDKGNYGTDNKQV
USA300_FPR3757 FVLFVLPLIGFILYLFFGRTVSARKLNKNNGNVLTDFDGLLKQQIESFDKGNYGTDNKQV
************************************************************
COL QKHHDLVRMLLMDQDGFLTENNKVDHFIDGNDLYDQVLKDIKNAKEYIHLEYYTFALDGL
N315 QKHHDLVSMLLMDQDGFLTENNKVDHFIDGNDLYDQVLKDIKNAKEYIHLEYYTFALDGL
NCTC8325 QKHHDLVRMLLMDQDGFLTENNKVDHFIDGNDLYDQVLKDIKNAKEYIHLEYYTFALDGL
Newman QKHHDLVRMLLMDQDGFLTENNKVDHFIDGNDLYDQVLKDIKNAKEYIHLEYYTFALDGL
USA300_FPR3757 QKHHDLVRMLLMDQDGFLTENNKVDHFIDGNDLYDQVLKDIKNAKEYIHLEYYTFALDGL
******* ****************************************************
COL GKRILHALEEKLKQGLEVKILYDDVGSKNVKMANFDHFKSLGGEVEAFFASKLPLLNFRM
N315 GKRILHALEEKLKQGLEVKILYDDVGSKNVKMANFDHFKSLGGEVEAFFASKLPLLNFRM
NCTC8325 GKRILHALEEKLKQGLEVKILYDDVGSKNVKMANFDHFKSLGGEVEAFFASKLPLLNFRM
Newman GKRILHALEEKLKQGLEVKILYDDVGSKNVKMANFDHFKSLGGEVEAFFASKLPLLNFRM
USA300_FPR3757 GKRILHALEEKLKQGLEVKILYDDVGSKNVKMANFDHFKSLGGEVEAFFASKLPLLNFRM
************************************************************
COL NNRNHRKIIVIDGQLGYVGGFNIGDEYLGLGKLGYWRDTHLRIQGDAVDALQLRFILDWN
N315 NNRNHRKIIVIDGQLGYVGGFNIGDEYLGLGKLGYWRDTHLRIQGDAVDALQLRFILDWN
NCTC8325 NNRNHRKIIVIDGQLGYVGGFNIGDEYLGLGKLGYWRDTHLRIQGDAVDALQLRFILDWN
Newman NNRNHRKIIVIDGQLGYVGGFNIGDEYLGLGKLGYWRDTHLRIQGDAVDALQLRFILDWN
USA300_FPR3757 NNRNHRKIIVIDGQLGYVGGFNIGDEYLGLGKLGYWRDTHLRIQGDAVDALQLRFILDWN
************************************************************
COL SQAHRPQFEYDVKYFPKKNGPLGNSPIQIAASGPASDWHQIEYGYTKMIMSAKKSVYLQS
N315 SQAHRPQFEYDVKYFPKKNGPLGNSPIQIAASGPASDWHQIEYGYTKMIMSAKKSVYLQS
NCTC8325 SQAHRPQFEYDVKYFPKKNGPLGNSPIQIAASGPASDWHQIEYGYTKMIMSAKKSVYLQS
Newman SQAHRPQFEYDVKYFPKKNGPLGNSPIQIAASGPASDWHQIEYGYTKMIMSAKKSVYLQS
USA300_FPR3757 SQAHRPQFEYDVKYFPKKNGPLGNSPIQIAASGPASDWHQIEYGYTKMIMSAKKSVYLQS
************************************************************
COL PYFIPDNSYINAIKIAAKSGVDVHLMIPCKPDHPLVYWATFSNASDLLSSGVKIYTYENG
N315 PYFIPDNSYINAIKIAAKSGVDVHLMIPCKPDHPLVYWATFSNASDLLSSGVKIYTYENG
NCTC8325 PYFIPDNSYINAIKIAAKSGVDVHLMIPCKPDHPLVYWATFSNASDLLSSGVKIYTYENG
Newman PYFIPDNSYINAIKIAAKSGVDVHLMIPCKPDHPLVYWATFSNASDLLSSGVKIYTYENG
USA300_FPR3757 PYFIPDNSYINAIKIAAKSGVDVHLMIPCKPDHPLVYWATFSNASDLLSSGVKIYTYENG
************************************************************
COL FIHSKMCLIDDEIVSVGTANMDFRSFELNFEVNAFVYDENLAKDLRVAYEHDITKSKQLT
N315 FIHSKMCLIDDEIVSVGTANMDFRSFELNFEVNAFVYDENLAKDLRVAYEHDITKSKQLT
NCTC8325 FIHSKMCLIDDEIVSVGTANMDFRSFELNFEVNAFVYDENLAKDLRVAYEHDITKSKQLT
Newman FIHSKMCLIDDEIVSVGTANMDFRSFELNFEVNAFVYDENLAKDLRVAYEHDITKSKQLT
USA300_FPR3757 FIHSKMCLIDDEIVSVGTANMDFRSFELNFEVNAFVYDENLAKDLRVAYEHDITKSKQLT
************************************************************
COL KESYANRPLSVKFKESLAKLVSPIL
N315 KESYANRPLSVKFKESLAKLVSPIL
NCTC8325 KESYANRPLSVKFKESLAKLVSPIL
Newman KESYANRPLSVKFKESLAKLVSPIL
USA300_FPR3757 KESYANRPLSVKFKESLAKLVSPIL
*************************