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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003696000
- symbol?: —
- synonym:
- description?: hypothetical protein
- strand?: -
- coordinates?: 4000961..4001815
- synteny block?: BlockID0027620
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1280
08BA02176:
C248_1359
11819-97:
MS7_1284
6850:
RSAU_001207
71193:
ST398NM01_1327
ECT-R 2:
ECTR2_1184
ED133:
SAOV_1338c
ED98:
SAAV_1304
HO 5096 0412:
SAEMRSA15_11720
JH1:
SaurJH1_1413
JH9:
SaurJH9_1386
JKD6008:
SAA6008_01290
JKD6159:
SAA6159_01192
LGA251:
SARLGA251_12340
M013:
M013TW_1273
MRSA252:
SAR1335
MSHR1132:
SAMSHR1132_11700
MSSA476:
SAS1265
Mu3:
SAHV_1314
Mu50:
SAV1325
MW2:
MW1212
RF122:
SAB1183c
ST398:
SAPIG1327
T0131:
SAT0131_01394 (rpsR)
TCH60:
HMPREF0772_11883
TW20:
SATW20_13270
USA300_TCH1516:
USA300HOU_1269
VC40:
SAVC_05865
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSFYVVLIIIIVALIGILVLNQRYSNSKIDTEVYARKQLIKKNKALSAENAELRSQMLSS
N315 MSFYVVLIIIIVALIGILVLNQRYSNSKIDTEVYARKQLIKKNKALSAENAELRSQMLSS
NCTC8325 MSFYVVLIIIIVALIGILVLNQRYSNSKIDTEVYARKQLIKKNKALSAENAELRSQMLSS
Newman MSFYVVLIIIIVALIGILVLNQRYSNSKIDTEVYARKQLIKKNKALSAENAELRSQMLSS
USA300_FPR3757 MSFYVVLIIIIVALIGILVLNQRYSNSKIDTEVYARKQLIKKNKALSAENAELRSQMLSS
************************************************************
COL NNDVGHHAYKNAKRELRKILDSYLENGKLKYYDIIVTSNLATKHPFFEYARSFDFIIVSD
N315 NNDVGHHAYKNAKRELRKILDSYLENGKLKYYDIIVTSNLATKHPFFEYARSFDFIIVSD
NCTC8325 NNDVGHHAYKNAKRELRKILDSYLENGKLKYYDIIVTSNLATKHPFFEYARSFDFIIVSD
Newman NNDVGHHAYKNAKRELRKILDSYLENGKLKYYDIIVTSNLATKHPFFEYARSFDFIIVSD
USA300_FPR3757 NNDVGHHAYKNAKRELRKILDSYLENGKLKYYDIIVTSNLATKHPFFEYARSFDFIIVSD
************************************************************
COL IGLINVDVKSWGEKTFYHFDVPDEHDTEISNSNIEKVVGHYISQQYHDQFNSSRKSIYTF
N315 IGLINVDVKSWGEKTFYHFDVPDEHDTEMSNSNIEKVVGHYISQQYHDQFNSSRKSIYTF
NCTC8325 IGLINVDVKSWGEKTFYHFDVPDEHDTEISNSNIEKVVGHYISQQYHDQFNSSRKSIYTF
Newman IGLINVDVKSWGEKTFYHFDVPDEHDTEISNSNIEKVVGHYISQQYHDQFNSSRKSIYTF
USA300_FPR3757 IGLINVDVKSWGEKTFYHFDVPDEHDTEISNSNIEKVVGHYISQQYHDQFNSSRKSIYTF
****************************:*******************************
COL TETVQPNRVIYDFYDYDPYQLAANNAKALKDHIEQNFNFKVQSTGVIYFSDGTVNIIQGS
N315 TETVQPNRVIYDFYDYDPYQLAANNAKALKDHIEQNFNFKVQSTGVIYFSDGTVNIIQGS
NCTC8325 TETVQPNRVIYDFYDYDPYQLAANNAKALKDHIEQNFNFKVQSTGVIYFSDGTVNIIQGS
Newman TETVQPNRVIYDFYDYDPYQLAANNAKALKDHIEQNFNFKVQSTGVIYFSDGTVNIIQGS
USA300_FPR3757 TETVQPNRVIYDFYDYDPYQLAANNAKALKDHIEQNFNFKVQSTGVIYFSDGTVNIIQGS
************************************************************
COL EERDKYVDTVSTKSSLRRIISEAIELSKHPLNKEQVDQITAIFK
N315 EERDKYVDTVSTKSSLRRIISEAIELSKHPLNKEQVDQITAIFK
NCTC8325 EERDKYVDTVSTKSSLRRIISEAIELSKHPLNKEQVDQITAIFK
Newman EERDKYVDTVSTKSSLRRIISEAIELSKHPLNKEQVDQITAIFK
USA300_FPR3757 EERDKYVDTVSTKSSLRRIISEAIELSKHPLNKEQVDQITAIFK
********************************************