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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003807000
- symbol?: asd
- synonym:
- description?: aspartate semialdehyde dehydrogenase
- strand?: +
- coordinates?: 4098450..4099439
- synteny block?: BlockID0028640
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1348 (asd)
08BA02176:
C248_1433 (asd)
11819-97:
MS7_1350 (asd)
6850:
RSAU_001273 (asd)
71193:
ST398NM01_1395
ECT-R 2:
ECTR2_1251 (asd)
ED133:
SAOV_1403 (asd)
ED98:
SAAV_1377 (asd)
HO 5096 0412:
SAEMRSA15_12570 (asd)
JH1:
SaurJH1_1484
JH9:
SaurJH9_1455
JKD6008:
SAA6008_01358 (asd)
JKD6159:
SAA6159_01260 (asd)
LGA251:
SARLGA251_13100 (asd)
M013:
M013TW_1338
MRSA252:
SAR1406 (asd)
MSHR1132:
SAMSHR1132_12350
MSSA476:
SAS1335
Mu3:
SAHV_1382 (asd)
Mu50:
SAV1394 (asd)
MW2:
MW1282 (asd)
RF122:
SAB1249 (asd)
ST398:
SAPIG1395 (asd)
T0131:
SAT0131_01468
TCH60:
HMPREF0772_11815 (asd)
TW20:
SATW20_13930 (asd)
USA300_TCH1516:
USA300HOU_1329 (asd)
VC40:
SAVC_06215
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTKLAVVGATGLVGTKMLETLNRKNIPFDELVLFSSARSAGQEVEFQGKTYTVQELTDAR
N315 MTKLAVVGATGLVGTKMLETLNRKNIPFDELVLFSSARSAGQEVEFQEKTYTVQELTDAR
NCTC8325 MTKLAVVGATGLVGTKMLETLNRKNIPFDELVLFSSARSAGQEVEFQGKTYTVQELTDAR
Newman MTKLAVVGATGLVGTKMLETLNRKNIPFDELVLFSSARSAGQEVEFQGKTYTVQELTDAR
USA300_FPR3757 MTKLAVVGATGLVGTKMLETLNRKNIPFDELVLFSSARSAGQEVEFQGKTYTVQELTDAR
*********************************************** ************
COL ASEHFDYVLMSAGGGTSEHFAPLFEKAGAIVIDNSSQWRMAEDIDLIVPEVNEPTFTRGI
N315 ASEHFDYVLMSAGGGTSEHFAPLFEKAGAIVIDNSSQWRMAEDIDLIVPEVNEPTFTRGI
NCTC8325 ASEHFDYVLMSAGGGTSEHFAPLFEKAGAIVIDNSSQWRMAEDIDLIVPEVNEPTFTRGI
Newman ASEHFDYVLMSAGGGTSEHFAPLFEKAGAIVIDNSSQWRMAEDIDLIVPEVNEPTFTRGI
USA300_FPR3757 ASEHFDYVLMSAGGGTSEHFAPLFEKAGAIVIDNSSQWRMAEDIDLIVPEVNEPTFTRGI
************************************************************
COL IANPNCSTIQSVVPLKVLQDAYGLKRVAYTTYQAVSGSGMKGKKDLAEGVNGKAPEAYPH
N315 IANPNCSTIQSVVPLKVLQDAYGLKRVAYTTYQAVSGSGMKGKKDLAEGVNGKAPEAYPH
NCTC8325 IANPNCSTIQSVVPLKVLQDAYGLKRVAYTTYQAVSGSGMKGKKDLAEGVNGKAPEAYPH
Newman IANPNCSTIQSVVPLKVLQDAYGLKRVAYTTYQAVSGSGMKGKKDLAEGVNGKAPEAYPH
USA300_FPR3757 IANPNCSTIQSVVPLKVLQDAYGLKRVAYTTYQAVSGSGMKGKKDLAEGVNGKAPEAYPH
************************************************************
COL PIYNNVLPHIDVFLENGYTKEEQKMIDETRKILNAPDLKVTATCARVPVQDSHSVEIDVT
N315 PIYNNVLPHIDVFLENGYTKEEQKMIDETRKILNAPDLKVTATCARVPVQDSHSVEIDVT
NCTC8325 PIYNNVLPHIDVFLENGYTKEEQKMIDETRKILNAPDLKVTATCARVPVQDSHSVEIDVT
Newman PIYNNVLPHIDVFLENGYTKEEQKMIDETRKILNAPDLKVTATCARVPVQDSHSVEIDVT
USA300_FPR3757 PIYNNVLPHIDVFLENGYTKEEQKMIDETRKILNAPDLKVTATCARVPVQDSHSVEIDVT
************************************************************
COL LDKETTAEDIKALFDQDDRVVLVDNPENNEYPMAINSTNKDEVFVGRIRRDDSLENTFHV
N315 LDKETTAEDIKALFDQDDRVVLVDNPENNEYPMAINSTNKDEVFVGRIRRDDSLENTFHV
NCTC8325 LDKETTAEDIKALFDQDDRVVLVDNPENNEYPMAINSTNKDEVFVGRIRRDDSLENTFHV
Newman LDKETTAEDIKALFDQDDRVVLVDNPENNEYPMAINSTNKDEVFVGRIRRDDSLENTFHV
USA300_FPR3757 LDKETTAEDIKALFDQDDRVVLVDNPENNEYPMAINSTNKDEVFVGRIRRDDSLENTFHV
************************************************************
COL WCTSDNLLKGAALNAVQVLEQVMRLKGAN
N315 WCTSDNLLKGAALNAVQVLEQVMRLKGAN
NCTC8325 WCTSDNLLKGAALNAVQVLEQVMRLKGAN
Newman WCTSDNLLKGAALNAVQVLEQVMRLKGAN
USA300_FPR3757 WCTSDNLLKGAALNAVQVLEQVMRLKGAN
*****************************