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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003835000
- symbol?: arlR
- synonym:
- description?: DNA-binding response regulator
- DNA-binding response regulator
- DNA-binding response regulator ArlR
- response regulator transcription factor ArlR
- truncated ( response regulator ArlR
- two-component DNA-binding response regulator ArlR, putative
- two-component response regulator
- Putative response regulator ArlR
- Response regulator ArlR
- response regulator protein
- response regulator receiver
- transcriptional regulatory protein ResD
- truncated (putative response regulator ArlR
- truncated response regulator
- two component transcriptional regulator
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4125272..4125931
- synteny block?: BlockID0028920
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1369 (arlR)
08BA02176:
C248_1454 (arlR)
11819-97:
MS7_1371 (arlR)
6850:
RSAU_001295 (arlR)
71193:
ST398NM01_1417
ECT-R 2:
ECTR2_1272
ED133:
SAOV_1425c
ED98:
SAAV_1399 (arlR)
HO 5096 0412:
SAEMRSA15_12780 (arlR)
JH1:
SaurJH1_1505
JH9:
SaurJH9_1476
JKD6008:
SAA6008_01381 (arlR)
JKD6159:
SAA6159_01282 (arlR)
LGA251:
SARLGA251_13320 (arlR)
M013:
M013TW_1362
MRSA252:
SAR1427 (arlR)
MSHR1132:
SAMSHR1132_12560
MSSA476:
SAS1358
Mu3:
SAHV_1403
Mu50:
SAV1415 (truncated-arlR)
MW2:
MW1305
RF122:
SAB1271c (arlR)
ST398:
SAPIG1417
T0131:
SAT0131_01493
TCH60:
HMPREF0772_11792
TW20:
SATW20_14160 (arlR)
USA300_TCH1516:
USA300HOU_1350 (arlR)
VC40:
SAVC_06325
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTQILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSING
N315 ------------------------------------------------------------
NCTC8325 MTQILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSING
Newman MTQILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSING
USA300_FPR3757 MTQILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSING
COL LEICRKIRQQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRRQP
N315 ------------------------------------------------------------
NCTC8325 LEICRKIRQQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRRQP
Newman LEICRKIRQQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRRQP
USA300_FPR3757 LEICRKIRQQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRRQP
COL QKDIIDVNGITIDKNAFKVTVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVWGYN
N315 ------------------MTVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVWGYN
NCTC8325 QKDIIDVNGITIDKNAFKVTVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVWGYN
Newman QKDIIDVNGITIDKNAFKVTVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVWGYN
USA300_FPR3757 QKDIIDVNGITIDKNAFKVTVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVWGYN
:*****************************************
COL SEVETNVVDVYIRYLRNKLKPYDRDKMIETVRGVGYVIR
N315 SEVETNVVDVYIRYLRNKLKPYDRDKMIETVRGVGYVIR
NCTC8325 SEVETNVVDVYIRYLRNKLKPYDRDKMIETVRGVGYVIR
Newman SEVETNVVDVYIRYLRNKLKPYDRDKMIETVRGVGYVIR
USA300_FPR3757 SEVETNVVDVYIRYLRNKLKPYDRDKMIETVRGVGYVIR
***************************************