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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003946000
- symbol?: ebpS
- synonym:
- description?: elastin-binding protein EbpS
- elastin-binding protein EbpS
- elastin binding protein
- cell surface elastin binding protein
- elastin-binding protein, putative
- Halomucin
- lysM domain protein
- peptidoglycan-binding LysM
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4260980..4262918
- synteny block?: BlockID0029920
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1437 (ebpS)
08BA02176:
C248_1521 (ebpS)
11819-97:
MS7_1434 (ebpS)
6850:
RSAU_001351 (ebpS)
71193:
ST398NM01_1480
ECT-R 2:
ECTR2_1332
ED133:
SAOV_1487 (ebpS)
ED98:
SAAV_1468
HO 5096 0412:
SAEMRSA15_13400 (ebpS)
JH1:
SaurJH1_1568
JH9:
SaurJH9_1537
JKD6008:
SAA6008_01449 (ebpS)
JKD6159:
SAA6159_01344 (ebpS)
LGA251:
SARLGA251_13930 (ebpS)
M013:
M013TW_1428
MRSA252:
SAR1489 (ebpS)
MSHR1132:
SAMSHR1132_13190
MSSA476:
SAS1421
Mu3:
SAHV_1469 (ebpS)
Mu50:
SAV1481 (ebpS)
MW2:
MW1369 (ebpS)
RF122:
SAB1343c (ebpS)
ST398:
SAPIG1480
T0131:
SAT0131_01570
TCH60:
HMPREF0772_11725 (ebpS)
TW20:
SATW20_14780 (ebpS)
USA300_TCH1516:
USA300HOU_1419 (ebpS)
VC40:
SAVC_06650
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSNNFKDDFEKNRQSIDTNSHQDHTEDVEKDQSELEHQDTIENTEQQFPPRNAQRRKRRR
N315 MSNNFKDDFEKNRQSIDTNSHQDHTEDVEKDQSELEHQDTIENTEQQFPPRNAQRRKRRR
NCTC8325 MSNNFKDDFEKNRQSIDTNSHQDHTEDVEKDQSELEHQDTIENTEQQFPPRNAQRRKRRR
Newman MSNNFKDDFEKNRQSIDTNSHQDHTEDVEKDQSELEHQDTIENTEQQFPPRNAQRRKRRR
USA300_FPR3757 MSNNFKDDFEKNRQSIDTNSHQDHTEDVEKDQSELEHQDTIENTEQQFPPRNAQRRKRRR
************************************************************
COL DLATNHNKQVHNESQTSEDNVQNEAGTIDDRQVESSHSTESQEPSHQDSTPQHEEEYYNK
N315 DLATNHNKQVHNESQTSEDNVQNEAGTIDDRQVESSHSTESQEPSHQDSTPQHEEEYYNK
NCTC8325 DLATNHNKQVHNESQTSEDNVQNEAGTIDDRQVESSHSTESQEPSHQDSTPQHEEEYYNK
Newman DLATNHNKQVHNESQTSEDNVQNEAGTIDDRQVESSHSTESQEPSHQDSTPQHEEEYYNK
USA300_FPR3757 DLATNHNKQVHNESQTSEDNVQNEAGTIDDRQVESSHSTESQEPSHQDSTPQHEEEYYNK
************************************************************
COL NAFAMDKSHPEPIEDNDKHDTIKNAENNTEHSTVSDKSEAEQSQQPKPYFTTGANQSETS
N315 NAFAMDKSHPEPIEDNDKHETIKDAENNTEHSTVSDKSIAEQSQQPKPYFATGANQANTS
NCTC8325 NAFAMDKSHPEPIEDNDKHDTIKNAENNTEHSTVSDKSEAEQSQQPKPYFTTGANQSETS
Newman NAFAMDKSHPEPIEDNDKHDTIKNAENNTEHSTVSDKSEAEQSQQPKPYFTTGANQSETS
USA300_FPR3757 NAFAMDKSHPEPIEDNDKHDTIKNAENNTEHSTVSDKSEAEQSQQPKPYFTTGANQSETS
*******************:***:************** ***********:*****::**
COL KNEHDNDSVKQDQDEPKEHHNGKKAAAIGAGTAGVAGAAGAMAASKAKKHSNDAQNKSNS
N315 KDKHDDVTVKQDKDESKDHHSGKKGAAIGAGTAGVAGAAGAMGVSKAKKHSNDAQNKSNS
NCTC8325 KNEHDNDSVKQDQDEPKEHHNGKKAAAIGAGTAGVAGAAGAMAASKAKKHSNDAQNKSNS
Newman KNEHDNDSVKQDQDEPKEHHNGKKAAAIGAGTAGVAGAAGAMAASKAKKHSNDAQNKSNS
USA300_FPR3757 KNEHDNDSVKQDQDEPKEHHNGKKAAAIGAGTAGVAGAAGAMAASKAKKHSNDAQNKSNS
*::**: :****:**.*:**.***.*****************..****************
COL GKANNSTEDKASQDKSKDHHNGKKGAAIGAGTAGLAGGAASKSASAASKPHASNNASQNH
N315 DKSNNSTEDKASQDKSKDHHNGKKGAAIGAGTAGLAGGAASKSASAASKPHASNNASQNH
NCTC8325 GKANNSTEDKASQDKSKDHHNGKKGAAIGAGTAGLAGGAASKSASAASKPHASNNASQNH
Newman GKANNSTEDKASQDKSKDHHNGKKGAAIGAGTAGLAGGAASKSASAASKPHASNNASQNH
USA300_FPR3757 GKANNSTEDKASQDKSKDHHNGKKGAAIGAGTAGLAGGAASKSASAASKPHASNNASQNH
.*:*********************************************************
COL DEHDNHDRDKERKKGGMAKVLLPLIAAVLIIGALAIFGGMALNNHNNGTKENKIANTNKN
N315 DEHDNHDRDKERKKGGMAKVLLPLIAAVLIIGALAIFGGMALNNHNNGTKENKIANTNKN
NCTC8325 DEHDNHDRDKERKKGGMAKVLLPLIAAVLIIGALAIFGGMALNNHNNGTKENKIANTNKN
Newman DEHDNHDRDKERKKGGMAKVLLPLIAAVLIIGALAIFGGMALNNHNNGTKENKIANTNKN
USA300_FPR3757 DEHDNHDRDKERKKGGMAKVLLPLIAAVLIIGALAIFGGMALNNHNNGTKENKIANTNKN
************************************************************
COL NADESKDKDTSKDASKDKSKSTDSDKSKEDQDKATKDESDNDQNNANQANNQAQNNQNQQ
N315 NADESKDKDTSKDASKDKSKSTDSDKSKEDQDKATKDESDNDQNNANQANNQAQNNQNQQ
NCTC8325 NADESKDKDTSKDASKDKSKSTDSDKSKEDQDKATKDESDNDQNNANQANNQAQNNQNQQ
Newman NADESKDKDTSKDASKDKSKSTDSDKSKEDQDKATKDESDNDQNNANQANNQAQNNQNQQ
USA300_FPR3757 NADESKDKDTSKDASKDKSKSTDSDKSKEDQDKATKDESDNDQNNANQANNQAQNNQNQQ
************************************************************
COL QANQNQQQQQQRQGGGQRHTVNGQENLYRIAIQYYGSGSPENVEKIRRANGLSGNNIRNG
N315 QANQNQQQQQQRQGGGQRHTVNGQENLYRIAIQYYGSGSPENVEKIRRANGLSGNNIRNG
NCTC8325 QANQNQQQQQQRQGGGQRHTVNGQENLYRIAIQYYGSGSPENVEKIRRANGLSGNNIRNG
Newman QANQNQQQQQQRQGGGQRHTVNGQENLYRIAIQYYGSGSPENVEKIRRANGLSGNNIRNG
USA300_FPR3757 QANQNQQQQQQRQGGGQRHTVNGQENLYRIAIQYYGSGSPENVEKIRRANGLSGNNIRNG
************************************************************
COL QQIVIP
N315 QQIVIP
NCTC8325 QQIVIP
Newman QQIVIP
USA300_FPR3757 QQIVIP
******