PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004093000
• symbol^?: —
• synonym:
• description^?: mannosyl-glycoprotein endo-beta-N-acetylglucosamidase

  descriptions from strain specific annotations:

  • mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
  • putative traG membrane protein
  • traG protein
  • Secretory antigen SsaA-like protein transposon-related protein
• strand^?: -
• coordinates^?: 4370014..4371000
• synteny block^?: BlockID0031230
• occurrence^?: in 27% of 33 strains

⊟Orthologs

COL:
SACOL1576
N315:
—
NCTC8325:
—
Newman:
—
USA300_FPR3757:
SAUSA300_1480
04-02981:
—
08BA02176:
—
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_12370
JH1:
—
JH9:
—
JKD6008:
SAA6008_02633
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
SAR1290
MSHR1132:
SAMSHR1132_15370
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
—
T0131:
SAT0131_02808
TCH60:
—
TW20:
SATW20_27150
USA300_TCH1516:
USA300HOU_0628
VC40:
—

⊟Genome Viewer

COL
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MVNKKDIAKKVIGKTPIGVKLKLAKVIIILCVVAFFTFPVIVMFLLAPDLNKGKDDAGCT
  USA300_FPR3757  MVNKKDIAKKVIGKTPIGVKLKLAKVIIILCVVAFFIFPVIIMFLLAPDLNKGKDDAGCT
                  ************************************ ****:******************
  
  COL             VSGGNVSANGIDKFNENAKGGKLEGKGKEIQKIAEKNKVPVNIFMAIIASESQWGKGENA
  USA300_FPR3757  VSGGNVSANGIDKFNENAKGGKLEGKGKEIQKIAEKNKVPVNIFMAIIASESQWGKGENA
                  ************************************************************
  
  COL             TRQNNPLSVMGSKSIHDSTYPTIEDGLNAGAKNLYDVYISKGLDTPKKIGPKYAPVGASN
  USA300_FPR3757  TRQNNPLSVMGSKSIHDSTYPTIEDGLNAGAKNLYDVYISKGLDTPKKIGPKYAPVGASN
                  ************************************************************
  
  COL             DPNNMNARWIPTVEKIMKDLGGSEAKTSCSNGKGKSIKFNGKLPHWSNDDPGKGNLYTAG
  USA300_FPR3757  DPNNMNARWIPTVEKIMKDLGGSEAKTSCSNGKGKSIKFNGKLPHWSNDDPGKGNLYTAG
                  ************************************************************
  
  COL             QCTWYAYGMRQKMGKPVSTYWHDAHKWNDRAKAEGYKVDKNPEPGALFIAEQGAGGHDGH
  USA300_FPR3757  QCTWYAYGMRQKMGKPVSTYWHDAHKWNDRAKAEGYKVDKNPEPGALFIAEQGAGGHDGH
                  ************************************************************
  
  COL             YGHVAVVIGVSDGGKTFRITEMNWEGAFKVNERTLKMTDGYSFIHDKE
  USA300_FPR3757  YGHVAVVIGVSDGGKTFRITEMNWEGAFKVNERTLKMTDGYSFIHDKE
                  ************************************************