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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004110000
- symbol?: lipM
- synonym:
- description?: octanoyltransferase LipM
- octanoyltransferase LipM
- biotin/lipoate A/B protein ligase
- biotin/lipoate A/B protein ligase family protein
- lipoate-protein ligase A, putative
- lipoate-protein ligase A family protein
- lipoate--protein ligase family protein
- Lipoate-protein ligase A
- lipoate protein ligase
- lipoate-protein ligase A protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4385692..4386522
- synteny block?: BlockID0031400
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1491
08BA02176:
C248_1575
11819-97:
MS7_1550 (lipM)
6850:
RSAU_001399
71193:
ST398NM01_1598
ECT-R 2:
ECTR2_1384
ED133:
SAOV_1533
ED98:
SAAV_1525
HO 5096 0412:
SAEMRSA15_14530
JH1:
SaurJH1_1624
JH9:
SaurJH9_1591
JKD6008:
SAA6008_01502
JKD6159:
SAA6159_01468
LGA251:
SARLGA251_14390
M013:
M013TW_1548
MRSA252:
SAR1610
MSHR1132:
SAMSHR1132_13730
MSSA476:
SAS1471
Mu3:
SAHV_1520
Mu50:
SAV1533
MW2:
MW1485
RF122:
SAB1405c
ST398:
SAPIG1598
T0131:
SAT0131_01626 (recR)
TCH60:
HMPREF0772_11608
TW20:
SATW20_15290
USA300_TCH1516:
USA300HOU_1534
VC40:
SAVC_06910
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTETWNFINTGSKDPYYNMAMDEALLNFVSRGEIDPVIRFYTWNPATLSIGYFQRLQKEI
N315 MTETWNFINTGSKDPYYNMAMDEALLNFVSRGEIDPVIRFYTWNPATLSIGYFQRLQKEI
NCTC8325 MTETWNFINTGSKDPYYNMAMDEALLNFVSRGEIDPVIRFYTWNPATLSIGYFQRLQKEI
Newman MTETWNFINTGSKDPYYNMAMDEALLNFVSRGEIDPVIRFYTWNPATLSIGYFQRLQKEI
USA300_FPR3757 MTETWNFINTGSKDPYYNMAMDEALLNFVSRGEIDPVIRFYTWNPATLSIGYFQRLQKEI
************************************************************
COL DIDKVKEKGFGLVRRQTGGRGVLHDKELTYSVIVPESHPNMPSTVTEAYRVISQGLLEGF
N315 DIDKVKEKGFGLVRRQTGGRGVLHDKELTYSVIVPESHPNMPSTVTEAYRVISQGLLEGF
NCTC8325 DIDKVKEKGFGLVRRQTGGRGVLHDKELTYSVIVPESHPNMPSTVTEAYRVISQGLLEGF
Newman DIDKVKEKGFGLVRRQTGGRGVLHDKELTYSVIVPESHPNMPSTVTEAYRVISQGLLEGF
USA300_FPR3757 DIDKVKEKGFGLVRRQTGGRGVLHDKELTYSVIVPESHPNMPSTVTEAYRVISQGLLEGF
************************************************************
COL KNLGFDTYFAVPKTPEERQKLKQPRSSVCFDAPSWYELVVEGRKIAGSAQTRQKGVILQH
N315 KNLGFDTYFAVPKTPEERQKLKQPRSSVCFDAPSWYELVVEGRKIAGSAQTRQKGVILQH
NCTC8325 KNLGFDTYFAVPKTPEERQKLKQPRSSVCFDAPSWYELVVEGRKIAGSAQTRQKGVILQH
Newman KNLGFDTYFAVPKTPEERQKLKQPRSSVCFDAPSWYELVVEGRKIAGSAQTRQKGVILQH
USA300_FPR3757 KNLGFDTYFAVPKTPEERQKLKQPRSSVCFDAPSWYELVVEGRKIAGSAQTRQKGVILQH
************************************************************
COL GSILQDIDIDELFDMFIYKNERLKLKMKEAFVEKAVAINDISDEHITISQMEEAFEKGFK
N315 GSILQDIDIDELFDMFIYKNERLKLKMKEAFVEKAVAINDISDEHITISQMEEAFEKGFK
NCTC8325 GSILQDIDIDELFDMFIYKNERLKLKMKEAFVEKAVAINDISDEHITISQMEEAFEKGFK
Newman GSILQDIDIDELFDMFIYKNERLKLKMKEAFVEKAVAINDISDEHITISQMEEAFEKGFK
USA300_FPR3757 GSILQDIDIDELFDMFIYKNERLKLKMKEAFVEKAVAINDISDEHITISQMEEAFEKGFK
************************************************************
COL KGLNIELKPLELTEAQLAEVEELTEKYRSDEWMFRK
N315 KGLNIELKPLELTEAQLAEVEELTEKYRSDEWMFRK
NCTC8325 KGLNIELKPLELTEAQLAEVEELTEKYRSDEWMFRK
Newman KGLNIELKPLELTEAQLAEVEELTEKYRSDEWMFRK
USA300_FPR3757 KGLNIEFKPLELTEAQLAEVEELTEKYRSDEWMFRK
******:*****************************