PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004166000
• symbol^?: hemN
• synonym:
• description^?: coproporphyrinogen III oxidase

  descriptions from strain specific annotations:

  • coproporphyrinogen III oxidase
  • oxygen-independent coproporphyrinogen III oxidase
  • oxygen-independent coproporphyrinogen III oxidase, putative
  • putative oxygen-independent coproporphyrinogenIII oxidase
  • coproporphyrinogen oxidase
  • oxygen-independent coproporphyrinogen III oxidase 1 (Coproporphyrinogenase) (Coprogen oxidase)
  • oxygen-independent coproporphyrinogen oxidase III
  • putative coproporphyrinogen III oxidase
  • Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent, in heat shock gene cluster
  • radical SAM superfamily protein
• strand^?: -
• coordinates^?: 4432103..4433068
• synteny block^?: BlockID0031960
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1640
N315:
SA1412 (hemN)
NCTC8325:
SAOUHSC_01686
Newman:
NWMN_1486 (hemN)
USA300_FPR3757:
SAUSA300_1543
04-02981:
SA2981_1541 (hemN)
08BA02176:
C248_1626
11819-97:
MS7_1600
6850:
RSAU_001448 (hemN)
71193:
ST398NM01_1649
ECT-R 2:
ECTR2_1433
ED133:
SAOV_1583
ED98:
SAAV_1575
HO 5096 0412:
SAEMRSA15_15030
JH1:
SaurJH1_1675
JH9:
SaurJH9_1641
JKD6008:
SAA6008_01553 (hemN)
JKD6159:
SAA6159_01518 (hemN)
LGA251:
SARLGA251_14890
M013:
M013TW_1598
MRSA252:
SAR1660
MSHR1132:
SAMSHR1132_14230
MSSA476:
SAS1521
Mu3:
SAHV_1570 (hemN)
Mu50:
SAV1583 (hemN)
MW2:
MW1535 (hemN)
RF122:
SAB1455c
ST398:
SAPIG1649
T0131:
SAT0131_01679 (nupC)
TCH60:
HMPREF0772_11557 (hemN)
TW20:
SATW20_15790
USA300_TCH1516:
USA300HOU_1584 (hemN)
VC40:
SAVC_07170

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MDKKSEKRGIKMTVQSAYIHIPFCVRICTYCDFNKYFIQNQPVDEYLDALITEMSTAKYR
  N315            -----------MTVQSAYIHIPFCVRICTYCDFNKYFIQNQPVDEYLDALITEMSTAKYR
  NCTC8325        -----------MTVQSAYIHIPFCVRICTYCDFNKYFIQNQPVDEYLDALITEMSTAKYR
  Newman          -----------MTVQSAYIHIPFCVRICTYCDFNKYFIQNQPVDEYLDALITEMSTAKYR
  USA300_FPR3757  -----------MTVQSAYIHIPFCVRICTYCDFNKYFIQNQPVDEYLDALITEMSTAKYR
                             *************************************************
  
  COL             ILKTMYVGGGTPTALSINQLERLLKAIRDTFTITGEYTFEANPDELTKEKVQLLEKYGVK
  N315            NLKTMYVGGGTPTALSINQLERLLKAIRDTFTITGEYTFEANPDELTKEKVQLLEKYGVN
  NCTC8325        ILKTMYVGGGTPTALSINQLERLLKAIRDTFTITGEYTFEANPDELTKEKVQLLEKYGVK
  Newman          ILKTMYVGGGTPTALSINQLERLLKAIRDTFTITGEYTFEANPDELTKEKVQLLEKYGVK
  USA300_FPR3757  ILKTMYVGGGTPTALSINQLERLLKAIRDTFTITGEYTFEANPDELTKEKVQLLEKYGVK
                   **********************************************************:
  
  COL             RISMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQS
  N315            RISMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQS
  NCTC8325        RISMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQS
  Newman          RISMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQS
  USA300_FPR3757  RISMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNTGIKSISLDLMYHLPKQTIEDFEQS
                  ***********************************:************************
  
  COL             LDLALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQ
  N315            LDLALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQ
  NCTC8325        LDLALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLANEDLGADMYQLLMSKIEQSPFHQ
  Newman          LDLALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQ
  USA300_FPR3757  LDLALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQ
                  ************************************.***********************
  
  COL             YEISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVNHYIKAINKESKA
  N315            YEISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVNHYIKAINKESKA
  NCTC8325        YEISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVNHYIKAINKESKA
  Newman          YEISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVNHYIKAINKESKA
  USA300_FPR3757  YEISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVNHYIKAINKESKA
                  ************************************************************
  
  COL             ILVSNKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVEK
  N315            ILVSNKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVEK
  NCTC8325        ILVSNKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVEK
  Newman          ILVSNKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVEK
  USA300_FPR3757  ILVSNKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVEK
                  ************************************************************
  
  COL             NDVIALTNRGKVIGNEVFEAFLIND
  N315            NDAIALTKRGKVIGNEVFEAFLIND
  NCTC8325        NDVIALTNRGKVIGNEVFEAFLIND
  Newman          NDVIALTNRGKVIGNEVFEAFLIND
  USA300_FPR3757  NDVIALTNRGKVIGNEVFEAFLIND
                  **.****:*****************