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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004312000
- symbol?: mutM
- synonym:
- description?: formamidopyrimidine-DNA glycosylase
- formamidopyrimidine-DNA glycosylase
- DNA-formamidopyrimidine glycosylase
- bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
- formamidopyrimidine-DNA glycosidaseMutM, putative
- formamidopyrimidine-DNA glycosidase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4551699..4552571
- synteny block?: BlockID0033360
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1648
08BA02176:
C248_1731
11819-97:
MS7_1696 (mutM)
6850:
RSAU_001547 (mutM)
71193:
ST398NM01_1743
ECT-R 2:
ECTR2_1529 (mutM)
ED133:
SAOV_1677
ED98:
SAAV_1679 (fpg)
HO 5096 0412:
SAEMRSA15_15990
JH1:
SaurJH1_1780
JH9:
SaurJH9_1746
JKD6008:
SAA6008_01656 (fpg)
JKD6159:
SAA6159_01613 (fpg)
LGA251:
SARLGA251_15810
M013:
M013TW_1702
MRSA252:
SAR1768
MSHR1132:
SAMSHR1132_15200
MSSA476:
SAS1617
Mu3:
SAHV_1675
Mu50:
SAV1689
MW2:
MW1632
RF122:
SAB1548c
ST398:
SAPIG1743 (mutM)
T0131:
SAT0131_01791
TCH60:
HMPREF0772_11462 (mutM)
TW20:
SATW20_16790
USA300_TCH1516:
USA300HOU_1676 (fpg)
VC40:
SAVC_07650
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT
N315 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT
NCTC8325 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT
Newman MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT
USA300_FPR3757 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT
************************************************************
COL ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN
N315 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN
NCTC8325 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN
Newman ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN
USA300_FPR3757 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN
************************************************************
COL DKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNKNKPIKQV
N315 DKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFTNEALTYYLNRIHQQSNKNKPIKQV
NCTC8325 DKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNKNKPIKQV
Newman DKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNKNKPIKQV
USA300_FPR3757 DKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNKNKPIKQV
***********************************:************************
COL ILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKYGGTSI
N315 ILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKHGGTSI
NCTC8325 ILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKYGGTSI
Newman ILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKYGGTSI
USA300_FPR3757 ILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKYGGTSI
******************************************************:*****
COL SDYRHADGKTGEMQLHLNVYKQPVCKVCGSQIETKIIATRNSHYCPVCQK
N315 SDYRHADGKTGEMQLHLNVYKQPVCKVCGSQIETKIIATRNSHYCPVCQK
NCTC8325 SDYRHADGKTGEMQLHLNVYKQPVCKVCGSQIETKIIATRNSHYCPVCQK
Newman SDYRHADGKTGEMQLHLNVYKQPVCKVCGSQIETKIIATRNSHYCPVCQK
USA300_FPR3757 SDYRHADGKTGEMQLHLNVYKQPVCKVCGSQIETKIIATRNSHYCPVCQK
**************************************************