Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004358000
- symbol?: —
- synonym:
- description?: metal-dependent hydrolase
- metal-dependent hydrolase
- metallo-beta-lactamase superfamily protein
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4598508..4599026
- synteny block?: BlockID0033630
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1665
08BA02176:
C248_1748
11819-97:
MS7_1713
6850:
RSAU_001564
71193:
ST398NM01_1760
ECT-R 2:
ECTR2_1547
ED133:
SAOV_1694
ED98:
SAAV_1716
HO 5096 0412:
SAEMRSA15_16160
JH1:
SaurJH1_1797
JH9:
SaurJH9_1763
JKD6008:
SAA6008_01675
JKD6159:
SAA6159_01631
LGA251:
SARLGA251_15980
M013:
M013TW_1719
MRSA252:
SAR1785
MSHR1132:
SAMSHR1132_15570
MSSA476:
SAS1634
Mu3:
SAHV_1693
Mu50:
SAV1707
MW2:
MW1650
RF122:
SAB1566c
ST398:
SAPIG1760
T0131:
SAT0131_01810 (mntC)
TCH60:
HMPREF0772_11445
TW20:
SATW20_16980
USA300_TCH1516:
USA300HOU_1693
VC40:
SAVC_07745
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
N315 MKLSFHGQSTIYLEGNNKKVIVDPFISNNPKCDLNIETVQVDYIVLTHGHFDHFGDVVEL
NCTC8325 MKLSFHGQSTIYLEGNNKKVIVDPFISNNPKCDLNIETVQVDYIVLTHGHFDHFGDVVEL
Newman MKLSFHGQSTIYLEGNNKKVIVDPFISNNPKCDLNIETVQVDYIVLTHGHFDHFGDVVEL
USA300_FPR3757 MKLSFHGQSTIYLEGNNKKVIVDPFISNNPKCDLNIETVQVDYIVLTHGHFDHFGDVVEL
************************************************************
N315 AKKTGATVIGSAEMADYLSSYHGVENVHGMNIGGKANFDFGSVKFVQAFHSSSFTHENGI
NCTC8325 AKKTGATVIGSAEMADYLSSYHGVENVHGMNIGGKANFDFGSVKFVQAFHSSSFTHENGI
Newman AKKTGATVIGSAEMADYLSSYHGVENVHGMNIGGKANFDFGSVKFVQAFHSSSFTHENGI
USA300_FPR3757 AKKTGATVIGSAEMADYLSSYHGVENVHGMNIGGKANFDFGSVKFVQAFHSSSFTHENGI
************************************************************
N315 PVYLGMPMGIVFEVEGKTIYHTGDTGLFSDMSLIAKRHPVDVCFVPIGDNFTMGIDDASY
NCTC8325 PVYLGMPMGIVFEVEGKTIYHTGDTGLFSDMSLIAKRHPVDVCFVPIGDNFTMGIDDASY
Newman PVYLGMPMGIVFEVEGKTIYHTGDTGLFSDMSLIAKRHPVDVCFVPIGDNFTMGIDDASY
USA300_FPR3757 PVYLGMPMGIVFEVEGKTIYHTGDTGLFSDMSLIAKRHPVDVCFVPIGDNFTMGIDDASY
************************************************************
N315 AINEFIKPKISVPIHYDTFPLIEQDPQQFKDAVNVGDVQILKPGESVQF
NCTC8325 AINEFIKPKISVPIHYDTFPLIEQDPQQFKDAVNVGDVQILKPGESVQF
Newman AINEFIKPKISVPIHYDTFPLIEQDPQQFKDAVNVGDVQILKPGESVQF
USA300_FPR3757 AINEFIKPKISVPIHYDTFPLIEQDPQQFKDAVNVGDVQILKPGESVQF
*************************************************