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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004378000
- symbol?: —
- synonym:
- description?: alanine--glyoxylate aminotransferase family protein
- alanine--glyoxylate aminotransferase family protein
- aminotransferase, class V
- aminotransferase, putative
- class V aminotransferase
- Phosphoserine aminotransferase, putative
- aminotransferase class-V family protein
- putative soluble hydrogenase subunit
- Serine-pyruvate aminotransferase
- soluble hydrogenase, small subunit (Tritium exchangesubunit)
- transaminase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4617203..4618363
- synteny block?: BlockID0033830
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1681
08BA02176:
C248_1763
11819-97:
MS7_1729
6850:
RSAU_001579
71193:
ST398NM01_1775
ECT-R 2:
ECTR2_1563
ED133:
SAOV_1709
ED98:
SAAV_1733
HO 5096 0412:
SAEMRSA15_16310
JH1:
SaurJH1_1813
JH9:
SaurJH9_1778
JKD6008:
SAA6008_01691
JKD6159:
SAA6159_01646
LGA251:
SARLGA251_16130
M013:
M013TW_1735
MRSA252:
SAR1800
MSHR1132:
SAMSHR1132_15730
MSSA476:
SAS1649
Mu3:
SAHV_1709
Mu50:
SAV1723
MW2:
MW1665
RF122:
SAB1581
ST398:
SAPIG1775
T0131:
SAT0131_01826
TCH60:
HMPREF0772_11430
TW20:
SATW20_17130
USA300_TCH1516:
USA300HOU_1711
VC40:
SAVC_07820
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MYYHQPLLLTPGPTPVPDAIMREIQAPMVGHRSKDFEDIAQQAFQGLKPIFGSQNDVLIL
N315 MYYHQPLLLTPGPTPVPDAIMREIQAPMVGHRSKDFEDIAQQAFQGLKPIFGSQNDVLIL
NCTC8325 MYYHQPLLLTPGPTPVPDAIMREIQAPMVGHRSKDFEDIAQQAFQGLKPIFGSQNDVLIL
Newman MYYHQPLLLTPGPTPVPDAIMREIQAPMVGHRSKDFEDIAQQAFQGLKPIFGSQNDVLIL
USA300_FPR3757 MYYHQPLLLTPGPTPVPDAIMREIQAPMVGHRSKDFEDIAQQAFQGLKPIFGSQNDVLIL
************************************************************
COL TSSGTSVLEASMLNIVNPEDHFVVIVSGAFGNRFKQIAQTYYKNVHIYDVTWGEAVDVKD
N315 TSSGTSVLEASMLNIVNPEDHFVVIVSGAFGNRFKQIAQTYYKNVHIYDVTWGEAVDVKD
NCTC8325 TSSGTSVLEASMLNIVNPEDHFVVIVSGAFGNRFKQIAQTYYKNVHIYDVTWGEAVDVKD
Newman TSSGTSVLEASMLNIVNPEDHFVVIVSGAFGNRFKQIAQTYYKNVHIYDVTWGEAVDVKD
USA300_FPR3757 TSSGTSVLEASMLNIVNPEDHFVVIVSGAFGNRFKQIAQTYYKNVHIYDVTWGEAVDVKD
************************************************************
COL FINFLSTLNVEVKAVFSQYCETSTTVLHPIHELGNAINQFNSNIYFVVDGVSCIGAVDVD
N315 FINYLSTLDVEVKAVFSQYCETSTTVLHPIHELGNAINQFNSNIYFVVDGVSCIGAVDVD
NCTC8325 FINFLSTLNVEVKAVFSQYCETSTTVLHPIHELGNAINQFNSNIYFVVDGVSCIGAVDVD
Newman FINFLSTLNVEVKAVFSQYCETSTTVLHPIHELGNAINQFNSNIYFVVDGVSCIGAVDVD
USA300_FPR3757 FINFLSTLNVEVKAVFSQYCETSTTVLHPIHELGNAINQFNSNIYFVVDGVSCIGAVDVD
***:****:***************************************************
COL INKDKIDVLVSGSQKAIMLPPGLAFVAYSHRAKEHFKEVTTPKFYLDLNKYISSQADNST
N315 INKDKIDVLVSGSQKAIMLPPGLAFVAYSHRAKERFKEVTTPKFYLDLNKYISSQADNST
NCTC8325 INKDKIDVLVSGSQKAIMLPPGLAFVAYSHRAKEHFKEVTTPKFYLDLNKYISSQADNST
Newman INKDKIDVLVSGSQKAIMLPPGLAFVAYSHRAKEHFKEVTTPKFYLDLNKYISSQADNST
USA300_FPR3757 INKDKIDVLVSGSQKAIMLPPGLAFVAYSHRAKEHFKEVTTPKFYLDLNKYISSQADNST
**********************************:*************************
COL PFTPNVSLFRGVNAYVETVKAEGFNHVIARHYAIRNALRSALKALDLTLLVNDKDASPTV
N315 PFTPNVSLFRGVNAYVETVKAEGFNHVIARHYAIRNALRSALKALDLTLLVNDKDASPTV
NCTC8325 PFTPNVSLFRGVNAYVETVKAEGFNHVIARHYAIRNALRSALKALDLTLLVNDKDASPTV
Newman PFTPNVSLFRGVNAYVETVKAEGFNHVIARHYAIRNALRSALKALDLTLLVNDKDASPTV
USA300_FPR3757 PFTPNVSLFRGVNAYVETVKAEGFNHVIARHYAIRNALRSALKALDLTLLVNDKDASPTV
************************************************************
COL TAFKPNTNDEVKIIKDELKNRFKITIAGGQGHLKGQILRIGHMGKISPFDILSVVSALEI
N315 TAFKPNTN-EVKIIKDELKNRFKITIAGGQGHLKGQILRIGHMGKISPFDILSVVSALEI
NCTC8325 TAFKPNTNDEVKIIKDELKNRFKITIAGGQGHLKGQILRIGHMGKISPFDILSVVSALEI
Newman TAFKPNTNDEVKIIKDELKNRFKITIAGGQGHLKGQILRIGHMGKISPFDILSVVSALEI
USA300_FPR3757 TAFKPNTNDEVKIIKDELKNRFKITIAGGQGHLKGQILRIGHMGKISPFDILSVVSALEI
******** ***************************************************
COL ILTEHRKVNYIGKGISKYMEVIHEAI
N315 ILTEHRKVNYIGKGISKYMEVIHEAI
NCTC8325 ILTEHRKVNYIGKGISKYMEVIHEAI
Newman ILTEHRKVNYIGKGISKYMEVIHEAI
USA300_FPR3757 ILTEHRKVNYIGKGISKYMEVIHEAI
**************************