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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004464000
- symbol?: arsB
- synonym:
- description?: arsenical efflux pump membrane protein ArsB
- arsenical efflux pump membrane protein ArsB
- aresenical pump membrane protein
- arsenical pump membrane protein
- arsenic efflux pump protein
- arsenite efflux transporter membrane subunit ArsB
- Ars family arsenical pump
- aesenical pump membrane protein
- ArsB arsenite-antimonite efflux family transporter membrane protein
- arsenical pump membrane family protein
- arsenical pump membrane protein (Arsenic efflux pump protein)
- arsenical pump membrane protein 2
- arsenic efflux pump protein ArsB
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4709194..4710492
- synteny block?: BlockID0034610
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1729
08BA02176:
C248_1819 (arsB2)
11819-97:
MS7_1776 (arsB)
6850:
RSAU_001628 (arsB)
71193:
ST398NM01_1824
ECT-R 2:
ECTR2_1610 (arsB)
ED133:
SAOV_1757 (arsB)
ED98:
SAAV_1784 (arsB)
HO 5096 0412:
SAEMRSA15_16800 (arsB2)
JH1:
SaurJH1_1861
JH9:
SaurJH9_1826
JKD6008:
SAA6008_01745 (arsB)
JKD6159:
—
LGA251:
SARLGA251_16600 (arsB2)
M013:
M013TW_1786
MRSA252:
SAR1856 (arsB2)
MSHR1132:
SAMSHR1132_16210
MSSA476:
SAS1697
Mu3:
SAHV_1759
Mu50:
SAV1774
MW2:
MW1714
RF122:
SAB1631 (arsB)
ST398:
SAPIG1824
T0131:
SAT0131_01888
TCH60:
HMPREF0772_11381 (arsB)
TW20:
SATW20_17630 (arsB2)
USA300_TCH1516:
USA300HOU_1763 (arsB)
VC40:
SAVC_08080
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MMTTLATLIFLVTLLFVLWQPKGLDIGITALTGAFIAVITGVVSFSDVFEVTGIVWNATL
N315 MMTTLATLIFLVTLLFVLWQPKGLDIGITALTGAFIAVITGVVSFSDVFEVTGIVWNATL
NCTC8325 MMTTLATLIFLVTLLFVLWQPKGLDIGITALTGAFIAVITGVVSFSDVFEVTGIVWNATL
Newman MMTTLATLIFLVTLLFVLWQPKGLDIGITALTGAFIAVITGVVSFSDVFEVTGIVWNATL
USA300_FPR3757 MMTTLATLIFLVTLLFVLWQPKGLDIGITALTGAFIAVITGVVSFSDVFEVTGIVWNATL
************************************************************
COL TFVSVILISLILDKVGLFEWSAIHMLHASKGNGLKMFVYIILLGAIVAAFFANDGAALIL
N315 TFVSVILISLILDKVGLFEWSAIHMLHASKGNGLKMFVYIILLGAIVAAFFANDGAALIL
NCTC8325 TFVSVILISLILDKVGLFEWSAIHMLHASKGNGLKMFVYIILLGAIVAAFFANDGAALIL
Newman TFVSVILISLILDKVGLFEWSAIHMLHASKGNGLKMFVYIILLGAIVAAFFANDGAALIL
USA300_FPR3757 TFVSVILISLILDKVGLFEWSAIHMLHASKGNGLKMFVYIILLGAIVAAFFANDGAALIL
************************************************************
COL TPIVLAMVKNIGFSKRAIFPFIIASGFIADTTSLPLIVSNLVNIISADYFHVGFVRYFSR
N315 TPIVLAMVKNIGFSKRAIFPFIIASGFIADTTSLPLIVSNLVNIISADYFHVGFVRYFSR
NCTC8325 TPIVLAMVKNIGFSKRAIFPFIIASGFIADTTSLPLIVSNLVNIISADYFHVGFVRYFSR
Newman TPIVLAMVKNIGFSKRAIFPFIIASGFIADTTSLPLIVSNLVNIISADYFHVGFVRYFSR
USA300_FPR3757 TPIVLAMVKNIGFSKRAIFPFIIASGFIADTTSLPLIVSNLVNIISADYFHVGFVRYFSR
************************************************************
COL MIIPNLFSLLASIIVLWLYFRKAIPKTFDDNNIKHPKDAINDLKLFKISWIVLVILLFGY
N315 MIIPNLFSLLASIIVLWLYFRKAIPKTFDDNNIKHPKDAINDLKLFKISWIVLVILLFGY
NCTC8325 MIIPNLFSLLASIIVLWLYFRKAIPKTFDDNNIKHPKDAINDLKLFKISWIVLVILLFGY
Newman MIIPNLFSLLASIIVLWLYFRKAIPKTFDDNNIKHPKDAINDLKLFKISWIVLVILLFGY
USA300_FPR3757 MIIPNLFSLLASIIVLWLYFRKAIPKTFDDNNIKHPKDAINDLKLFKISWIVLVILLFGY
************************************************************
COL LISEFTKIPVSIFTGIIAFIFLMLARKSNAVNIKQVIKGAPWNIVLFSIGMYIVVFGLRN
N315 LISEFTKIPVSIFTGIIAFIFLMLARKSNAVNIKQVIKGAPWNIVLFSIGMYIVVFGLRN
NCTC8325 LISKFTKIPVSIFTGIIAFIFLMLARKSNAVNIKQVIKGAPWNIVLFSIGMYIVVFGLRN
Newman LISEFTKIPVSIFTGIIAFIFLMLARKSNAVNIKQVIKGAPWNIVLFSIGMYIVVFGLRN
USA300_FPR3757 LISEFTKIPVSIFTGIIAFIFLMLARKSNAVNIKQVIKGAPWNIVLFSIGMYIVVFGLRN
***:********************************************************
COL AGITLILAKILEYISNYGLFSTILGMGFISAFLSSIMNNMPTVLIDAIAIGQSNVHGMLK
N315 AGITLILAKILEYISNYGLFSTILGMGFISAFLSSIMNNMPTVLIDAIAIGQSNVHGMLK
NCTC8325 AGITLILAKILEYISNYGLFSTILGMGFISAFLSSIMNNMPTVLIDAIAIGQSNVHGMLK
Newman AGITLILAKILEYISNYGLFSTILGMGFISAFLSSIMNNMPTVLIDAIAIGQSNVHGMLK
USA300_FPR3757 AGITLILAKILEYISNYGLFSTILGMGFISAFLSSIMNNMPTVLIDAIAIGQSNVHGMLK
************************************************************
COL EGLIYANVIGSDLGPKITPIGSLATLLWLHVLTQKDVKISWGTYFKTGIIITIPVLFITL
N315 EGLIYANVIGSDLGPKITPIGSLATLLWLHVLTQKDVKISWGTYFKTGIIITIPVLFITL
NCTC8325 EGLIYANVIGSDLGPKITPIGSLATLLWLHVLTQKDVKISWGTYFKTGIIITIPVLFITL
Newman EGLIYANVIGSDLGPKITPIGSLATLLWLHVLTQKDVKISWGTYFKTGIIITIPVLFITL
USA300_FPR3757 EGLIYANVIGSDLGPKITPIGSLATLLWLHVLTQKDVKISWGTYFKTGIIITIPVLFITL
************************************************************
COL IGLYLTLIIF
N315 IGLYLTLIIF
NCTC8325 IGLYLTLIIF
Newman IGLYLTLIIF
USA300_FPR3757 IGLYLTLIIF
**********