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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004558000
- symbol?: splF
- synonym:
- description?: serine protease SplF
- serine protease SplF
- serine proteinase
- peptidase S1 and S6, chymotrypsin/Hap
- peptidase S1 and S6 chymotrypsin/Hap
- pseudogene
- S1B family serine protease SplF
- serine protease SplF, putative
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4789723..4790442
- synteny block?: BlockID0035470
- occurrence?: in 76% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1764 (splF)
08BA02176:
—
11819-97:
MS7_1809
6850:
RSAU_001666 (splF)
71193:
—
ECT-R 2:
ECTR2_1642
ED133:
SAOV_1795 (splF)
ED98:
SAAV_1817
HO 5096 0412:
—
JH1:
SaurJH1_1896
JH9:
SaurJH9_1861
JKD6008:
—
JKD6159:
—
LGA251:
SARLGA251_16910
M013:
—
MRSA252:
SAR1900 (splF)
MSHR1132:
—
MSSA476:
SAS1733
Mu3:
SAHV_1794 (splF)
Mu50:
SAV1809 (splF)
MW2:
MW1752 (splF)
RF122:
SAB1669c (splF)
ST398:
—
T0131:
SAT0131_01929 (saeR)
TCH60:
HMPREF0772_11334 (splF)
TW20:
SATW20_18060 (splF)
USA300_TCH1516:
USA300HOU_1801 (splF)
VC40:
SAVC_08280
⊟Genome Viewer[edit | edit source]
COL | |
N315 | |
NCTC8325 | |
Newman | |
USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNKNIIIKSIAALTILTSITGVGTTMVEGIQQTAKAENTVKQITNTNVAPYSGVTWMGAG
N315 MNKNIIIKSIAALTILTSVTGVGTTMVEGIQQTAKAENTVKQITNTNVAPYSGVTWMGAG
NCTC8325 MNKNIIIKSIAALTILTSITGVGTTMVEGIQQTAKAENTVKQITNTNVAPYSGVTWMGAG
Newman MNKNIIIKSIAALTILTSITGVGTTMVEGIQQTAKAENTVKQITNTNVAPYSGVTWMGAG
USA300_FPR3757 MNKNIIIKSIGALTILTSITGVGTTMVEGIQQTAKAENTVKQITNTNVAPYSGVTWMGAG
**********.*******:*****************************************
COL TGFVVGNHTIITNKHVTYHMKVGDEIKAHPNGFYNNGGGLYKVTKIVDYPGKEDIAVVQV
N315 TGFVVGNHTIITNKHVTYHMKVGDEIKAHPNGFYNNGGGLYKVTKIVDYPGKEDIAVVQV
NCTC8325 TGFVVGNHTIITNKHVTYHMKVGDEIKAHPNGFYNNGGGLYKVTKIVDYPGKEDIAVVQV
Newman TGFVVGNHTIITNKHVTYHMKVGDEIKAHPNGFYNNGGGLYKVTKIVDYPGKEDIAVVQV
USA300_FPR3757 TGFVVGNHTIITNKHVTYHMKVGDEIKAHPNGFYNNGGGLYKVTKIVDYPGKEDIAVVQV
************************************************************
COL EEKSTQPKGRKFKDFTSKFNIASEAKENEPISVIGYPNPNGNKLQMYESTGKVLSVNGNI
N315 EEKSTQPKGRKFKDFTSKFNIASEAKENEPISVIGYPNPNGNKLQMYESTGKVLSVNGNI
NCTC8325 EEKSTQPKGRKFKDFTSKFNIASEAKENEPISVIGYPNPNGNKLQMYESTGKVLSVNGNI
Newman EEKSTQPKGRKFKDFTSKFNIASEAKENEPISVIGYPNPNGNKLQMYESTGKVLSVNGNI
USA300_FPR3757 EEKSTQPKGRKFKDFTSKFNIASEAKENEPISVIGYPNPNGNKLQMYESTGKVLSVNGNI
************************************************************
COL VSSDAIIQPGSSGSPILNSKHEAIGVIYAGNKPSGESTRGFAVYFSPEIKKFIADNLDK
N315 VSSDAIIQPGSSGSPILNSKHEAIGVIYAGNKPSGESTRGFAVYFSPEIKKFIADNLDK
NCTC8325 VSSDAIIQPGSSGSPILNSKHEAIGVIYAGNKPSGESTRGFAVYFSPEIKKFIADNLDK
Newman VSSDAIIQPGSSGSPILNSKHEAIGVIYAGNKPSGESTRGFAVYFSPEIKKFIADNLDK
USA300_FPR3757 VSSDAIIQPGSSGSPILNSKHEAIGVIYAGNKPSGESTRGFAVYFSPEIKKFIADNLDK
***********************************************************