PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004764000
• symbol^?: —
• synonym:
• description^?: putative staphylococcal protein

  descriptions from strain specific annotations:

  • putative staphylococcal protein
  • YtxH domain-containing protein
  • exported protein
  • gas vesicle protein
  • Gas vesicle protein-like protein
• strand^?: +
• coordinates^?: 4977365..4977730
• synteny block^?: BlockID0036960
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1895
N315:
SA1657
NCTC8325:
SAOUHSC_01969
Newman:
NWMN_1730
USA300_FPR3757:
SAUSA300_1788
04-02981:
SA2981_1795
08BA02176:
C248_1880
11819-97:
MS7_1844
6850:
RSAU_001698
71193:
ST398NM01_1904
ECT-R 2:
ECTR2_1681
ED133:
SAOV_1834
ED98:
SAAV_1858
HO 5096 0412:
SAEMRSA15_17430
JH1:
SaurJH1_1926
JH9:
SaurJH9_1892
JKD6008:
SAA6008_01796 (gvpP)
JKD6159:
SAA6159_01767 (gvpP)
LGA251:
SARLGA251_17220
M013:
M013TW_1845
MRSA252:
SAR1930
MSHR1132:
SAMSHR1132_16850
MSSA476:
SAS1760
Mu3:
SAHV_1824
Mu50:
SAV1839
MW2:
MW1779
RF122:
SAB1770
ST398:
SAPIG1904
T0131:
SAT0131_01959
TCH60:
HMPREF0772_11306
TW20:
SATW20_18330
USA300_TCH1516:
USA300HOU_1831
VC40:
SAVC_08425

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKASRILFGIGVGVAAGFVVALQGRDDKSVKNNTIDRTAPTGSKSELQREFETIKQSFND
  N315            MKASRILFGIGVGVAAGFVVALQGRDDKSVKNNTIDRTAPTGSKSELQREFETIKQSFND
  NCTC8325        MKASRILFGIGVGVAAGFVVALQGRDDKSVKNNTIDRTAPTGSKSELQREFETIKQSFND
  Newman          MKASRILFGIGVGVAAGFVVALQGRDDKSVKNNTIDRTAPTGSKSELQREFETIKQSFND
  USA300_FPR3757  MKASRILFGIGVGVAAGFVVALQGRDDKSVKNNTIDRTAPTGSKSELQREFETIKQSFND
                  ************************************************************
  
  COL             ILNYGVQIKNESAEFGSSIGGEIKSLLGNFKSDINPNIERLQSHIENLQNRGEDIGNEIS
  N315            ILNYGVQIKNESAEFGSSIGGEIKSLLGNFKSDINPNIERLQSHIENLQNRGEDIGNEIS
  NCTC8325        ILNYGVQIKNESAEFGSSIGGEIKSLLGNFKSDINPNIERLQSHIENLQNRGEDIGNEIS
  Newman          ILNYGVQIKNESAEFGSSIGGEIKSLLGNFKSDINPNIERLQSHIENLQNRGEDIGNEIS
  USA300_FPR3757  ILNYGVQIKNESAEFGSSIGGEIKSLLGNFKSDINPNIERLQSHIENLQNRGEDIGNEIS
                  ************************************************************
  
  COL             K
  N315            K
  NCTC8325        K
  Newman          K
  USA300_FPR3757  K
                  *