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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004850000
- symbol?: mutY
- synonym:
- description?: A/G-specific adenine glycosylase
- A/G-specific adenine glycosylase
- A-G-specific adenine glycosylase, putative
- HhH-GPD superfamily base excision DNA repairprotein
- A/G-specific adenine glycosylase DNA repair protein
- A/G-specific DNA glycosylase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5056921..5057959
- synteny block?: BlockID0037800
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1824
08BA02176:
C248_1939
11819-97:
MS7_1903 (mutY)
6850:
RSAU_001755 (mutY)
71193:
ST398NM01_1961
ECT-R 2:
ECTR2_1739 (mutY)
ED133:
SAOV_1895
ED98:
SAAV_1918 (mutY)
HO 5096 0412:
SAEMRSA15_17750
JH1:
SaurJH1_1956
JH9:
SaurJH9_1922
JKD6008:
SAA6008_01825 (mutY)
JKD6159:
SAA6159_01799 (mutY)
LGA251:
SARLGA251_17500
M013:
M013TW_1904
MRSA252:
SAR1958
MSHR1132:
SAMSHR1132_17130
MSSA476:
SAS1790
Mu3:
SAHV_1853
Mu50:
SAV1868
MW2:
MW1808
RF122:
SAB1801c
ST398:
SAPIG1961 (mutY)
T0131:
SAT0131_01990
TCH60:
HMPREF0772_11276 (mutY)
TW20:
SATW20_18620
USA300_TCH1516:
USA300HOU_1863 (mutY)
VC40:
SAVC_08595
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MYQQSSFKENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFP
N315 MYQQSSFKENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFP
NCTC8325 MYQQSSFKENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFP
Newman MYQQSSFKENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFP
USA300_FPR3757 MYQQSSFKENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFP
************************************************************
COL TVEVLSQASEDEVLKYWEGLGYYSRARNFHTAIKEVHDKYEGLVPKDPDQFKALKGVGPY
N315 TVEVLSQASEDEVLKYWEGLGYYSRARNFHTAIKEVYDKYEGLVPKDPDQFKALKGVGPY
NCTC8325 TVEVLSQASEDEVLKYWEGLGYYSRARNFHTAIKEVHDKYEGLVPKDPDQFKALKGVGPY
Newman TVEVLSQASEDEVLKYWEGLGYYSRARNFHTAIKEVHDKYEGLVPKDPDQFKALKGVGPY
USA300_FPR3757 TVEVLSQASEDEVLKYWEGLGYYSRARNFHTAIKEVHDKYEGLVPKDPDQFKALKGVGPY
************************************:***********************
COL TQAAVMSIAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFN
N315 TQAAVMSIAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFN
NCTC8325 TQAAVMSIAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFN
Newman TQAAVMSIAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFN
USA300_FPR3757 TQAAVMSIAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFN
************************************************************
COL QAMMELGALICTPKNPLCLFCPVQENCEAFDKGTFEKLPVKSKNVSKKVIEQSVFLIRNN
N315 QAMMELGALICTPKNPLCLFCPVQENCEAFDKGTFEKLPVKSKNVSKKVIEQSVFLIRNN
NCTC8325 QAMMELGALICTPKNPLCLFCPVQENCEAFDKGTFEKLPVKSKNVSKKVIEQSVFLIRNN
Newman QAMMELGALICTPKNPLCLFCPVQENCEAFDKGTFEKLPVKSKNVSKKVIEQSVFLIRNN
USA300_FPR3757 QAMMELGALICTPKNPLCLFCPVQENCEAFDKGTFEKLPVKSKNVSKKVIEQSVFLIRNN
************************************************************
COL QGQYLLQKRSEKLLHGMWQFPMFESEHARRKMTEKIGHDIQPVETPIFELKHQFTHLTWK
N315 QGQYLLQKRSEKLLHGMWQFPMFESEHARRKMTEKIGHDIQPVETPIFELKHQFTHLTWK
NCTC8325 QGQYLLQKRSEKLLHGMWQFPMFESEHARRKMTEKIGHDIQPVETPIFELKHQFTHLTWK
Newman QGQYLLQKRSEKLLHGMWQFPMFESEHARRKMTEKIGHDIQPVETPIFELKHQFTHLTWK
USA300_FPR3757 QGQYLLQKRSEKLLHGMWQFPMFESEHARRKMTEKIGHDIQPVETPIFELKHQFTHLTWK
************************************************************
COL IKVYAVSGAINIETLPDDMIWFDLSDRDQYTFPVPMSKIYQFING
N315 IKVYAASGAINIETLPDDMIWFNLSDRDQYTFPVPMSKIYQFING
NCTC8325 IKVYAVSGAINIETLPDDMIWFDLSDRDQYTFPVPMSKIYQFING
Newman IKVYAVSGAINIETLPDDMIWFDLSDRDQYTFPVPMSKIYQFING
USA300_FPR3757 IKVYAVSGAINIETLPDDMIWFDLSDRDQYTFPVPMSKIYQFING
*****.****************:**********************