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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004898000
- symbol?: —
- synonym:
- description?: YihY/virulence factor BrkB family protein
- YihY/virulence factor BrkB family protein
- ribonuclease BN
- BrkB-like complement resistance virulence factor, putative
- membrane protein
- ribonuclease BN, putative
- transporter
- YihY family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5093889..5095118
- synteny block?: BlockID0038040
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1839
08BA02176:
C248_1955
11819-97:
MS7_1918 (yihY)
6850:
RSAU_001770
71193:
ST398NM01_1976
ECT-R 2:
ECTR2_1754 (yihY)
ED133:
SAOV_1981
ED98:
SAAV_1948
HO 5096 0412:
SAEMRSA15_17900
JH1:
SaurJH1_1971
JH9:
SaurJH9_1937
JKD6008:
SAA6008_01903
JKD6159:
SAA6159_01814
LGA251:
SARLGA251_17650
M013:
M013TW_1919
MRSA252:
SAR1973
MSHR1132:
SAMSHR1132_17280
MSSA476:
SAS1805
Mu3:
SAHV_1868
Mu50:
SAV1883
MW2:
MW1823
RF122:
SAB1815
ST398:
SAPIG1976
T0131:
SAT0131_02007 (ddh)
TCH60:
HMPREF0772_11261 (yihY)
TW20:
SATW20_18770
USA300_TCH1516:
USA300HOU_1879
VC40:
SAVC_08670
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSKKDHSSSKYLNSVKEAQEESKKKNKSNPKIDVDRTYIEPQQFQSKKPKKDDQVFFLSR
N315 MSKKDHSSSKYLNSVKEAQEESKKKNKSNPKIDVDRTYIEPQQFQSKKPKKDDQVFFLSR
NCTC8325 MSKKDHSSSKYLNSVKEAQEESKKKNKSNPKIDVDRTYIEPQQFQSKKPKKDDQVFFLSR
Newman MSKKDHSSSKYLNSVKEAQEESKKKNKSNPKIDVDRTYIEPQQFQSKKPKKDDQVFFLSR
USA300_FPR3757 MSKKDHSSSKYLNSVKEAQEESKKKNKSNPKIDVDRTYIEPQQFQSKKPKKDDQVFFLSR
************************************************************
COL LNKPAKYKKDSNFLSYLIYRIGKDDASGLAAQMTYHFVLAMFPMLLFLLTLLPFFNIKQS
N315 LNKPAKYKKDSNFLSYLIYRIGKDDASGLAAQMTYHFVLAMFPMLLFLLTLLPFFNIKQS
NCTC8325 LNKPAKYKKDSNFLSYLIYRIGKDDASGLAAQMTYHFVLAMFPMLLFLLTLLPFFNIKQS
Newman LNKPAKYKKDSNFLSYLIYRIGKDDASGLAAQMTYHFVLAMFPMLLFLLTLLPFFNIKQS
USA300_FPR3757 LNKPAKYKKDSNFLSYLIYRIGKDDASGLAAQMTYHFVLAMFPMLLFLLTLLPFFNIKQS
************************************************************
COL QITNMLSNAPAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYD
N315 QITNMLSNAPAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYD
NCTC8325 QITNMLSNAPAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYD
Newman QITNMLSNAPAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYD
USA300_FPR3757 QITNMLSNAPAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYD
************************************************************
COL VEDSRNGIVLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIR
N315 VEDSRNGIVLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIR
NCTC8325 VEDSRNGIVLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIR
Newman VEDSRNGIVLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIR
USA300_FPR3757 VEDSRNGIVLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIR
************************************************************
COL IVLPIIIIFIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKT
N315 IVLPIIIIFIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKT
NCTC8325 IVLPIIIIFIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKT
Newman IVLPIIIIFIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKT
USA300_FPR3757 IVLPIIIIFIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKT
************************************************************
COL YGSIAGIIILLLWLYITSFIIIVGAEINAIIHQRSVIKGKTPEEAALEHDDNNKNHYNEN
N315 YGSIAGIIILLLWLYITSFIIIVGAEINAIIHQRSVIKGKTPEEAALEHDDNNKNHYNEN
NCTC8325 YGSIAGIIILLLWLYITSFIIIVGAEINAIIHQRSVIKGKTPEEAALEHDDNNKNHYNEN
Newman YGSIAGIIILLLWLYITSFIIIVGAEINAIIHQRSVIKGKTPEEAALEHDDNNKNHYNEN
USA300_FPR3757 YGSIAGIIILLLWLYITSFIIIVGAEINAIIHQRSVIKGKTPEEAALEHDDNNKNHYNEN
************************************************************
COL TRYEYDDDSNATHQRTYHVDEHPSDTYPEDDKNIKDKIVDKLKKD
N315 TRYEYDEDSNATHQRTYHVDEHPSDTYPEDDKNIKDKIVDKLKKD
NCTC8325 TRYEYDEDSNATHQRTYHVDEHPSDTYPEDDKNIKDKIVDKLKKD
Newman TRYEYDEDSNATHQRTYHVDEHPSDTYPEDDKNIKDKIVDKLKKD
USA300_FPR3757 TRYEYDEDSNATHQRTYHVDEHPSDTYPEDDKNIKDKIVDKLKKD
******:**************************************