PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005281000
• symbol^?: agrA
• synonym:
• description^?: DNA-binding response regulator

  descriptions from strain specific annotations:

  • DNA-binding response regulator
  • accessory gene regulator protein A
  • accessory gene regulator A
  • response regulator transcription factor
  • staphylococcal accessory gene regulator A
  • Response regulator of the competence regulon ComE
  • AgrA
  • agrA protein
  • autoinducer sensor protein response regulator protein
  • LytTR family two component transcriptional regulator
  • response regulator receiver
• strand^?: +
• coordinates^?: 5446681..5447397
• synteny block^?: BlockID0040810
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL2026 (agrA)
N315:
SA1844 (agrA)
NCTC8325:
SAOUHSC_02265
Newman:
NWMN_1946 (agrA)
USA300_FPR3757:
SAUSA300_1992 (agrA)
04-02981:
SA2981_1980 (agrA)
08BA02176:
C248_2043 (agrA)
11819-97:
MS7_2050 (agrA)
6850:
RSAU_001872 (agrA)
71193:
ST398NM01_2076
ECT-R 2:
ECTR2_1890
ED133:
SAOV_2076
ED98:
SAAV_2087 (agrA)
HO 5096 0412:
SAEMRSA15_19470 (agrA)
JH1:
SaurJH1_2112
JH9:
SaurJH9_2076
JKD6008:
SAA6008_02077 (agrA)
JKD6159:
SAA6159_01952 (agrA)
LGA251:
SARLGA251_18410 (agrA)
M013:
M013TW_1991
MRSA252:
SAR2126 (agrA)
MSHR1132:
SAMSHR1132_18610
MSSA476:
SAS1944
Mu3:
SAHV_2024 (agrA)
Mu50:
SAV2039 (agrA)
MW2:
MW1963 (agrA)
RF122:
SAB1923 (agrA)
ST398:
SAPIG2076
T0131:
SAT0131_02189
TCH60:
HMPREF0772_11160 (agrA)
TW20:
SATW20_20220 (agrA)
USA300_TCH1516:
USA300HOU_2035 (agrA)
VC40:
SAVC_09075

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDI
  N315            MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDI
  NCTC8325        ------------------------------MEIALATDNPYEVLEQAKNMNDIGCYFLDI
  Newman          MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDI
  USA300_FPR3757  ------------------------------MEIALATDNPYEVLEQAKNMNDIGCYFLDI
                                                ******************************
  
  COL             QLSTDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRI
  N315            QLSTDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRI
  NCTC8325        QLSTDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRI
  Newman          QLSTDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRI
  USA300_FPR3757  QLSTDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRI
                  ************************************************************
  
  COL             IDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQI
  N315            IDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQI
  NCTC8325        IDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQI
  Newman          IDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQI
  USA300_FPR3757  IDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQI
                  ************************************************************
  
  COL             EFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI
  N315            EFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI
  NCTC8325        EFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI
  Newman          EFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI
  USA300_FPR3757  EFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI
                  **********************************************************