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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005285000
- symbol?: scrR
- synonym:
- description?: LacI family transcriptional regulator
- LacI family transcriptional regulator
- sucrose operon repressor
- sucrose operon repressor, putative
- bacterial regulatory s, lacI family protein
- sucrose operon repressor (Scr operon regulatory protein)
- Sucrose operon repressor ScrR, LacI family
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5450374..5451324
- synteny block?: BlockID0040850
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1983 (scrR)
08BA02176:
C248_2046 (scrR)
11819-97:
MS7_2053
6850:
RSAU_001875 (scrR)
71193:
ST398NM01_2079
ECT-R 2:
ECTR2_1893
ED133:
SAOV_2079c
ED98:
SAAV_2090 (scrR)
HO 5096 0412:
SAEMRSA15_19500 (scrR)
JH1:
SaurJH1_2115
JH9:
SaurJH9_2079
JKD6008:
SAA6008_02080 (scrR)
JKD6159:
SAA6159_01955 (scrR)
LGA251:
SARLGA251_18440 (scrR)
M013:
M013TW_1994
MRSA252:
SAR2129 (scrR)
MSHR1132:
SAMSHR1132_18640
MSSA476:
SAS1947
Mu3:
SAHV_2027 (scrR)
Mu50:
SAV2042 (scrR)
MW2:
MW1966 (scrR)
RF122:
SAB1926c (scrR)
ST398:
SAPIG2079
T0131:
SAT0131_02192
TCH60:
HMPREF0772_11157 (scrR)
TW20:
SATW20_20250 (scrR)
USA300_TCH1516:
USA300HOU_2039 (scrR)
VC40:
SAVC_09090
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKNISDIAKLAGVSKSTVSRFLNNGSVSKKTSEKLTRIIAEHDYQPNQFAQSLRARQTHL
N315 MKNISDIAKLAGVSKSTVSRFLNNGSVSKKTSEKLTRIIAEHDYQPNQFAQSLRARQTHL
NCTC8325 MKNISDIAKLAGVSKSTVSRFLNNGSVSKKTSEKLTRIIAEHDYQPNQFAQSLRARQTHL
Newman MKNISDIAKLAGVSKSTVSRFLNNGSVSKKTSEKLTRIIAEHDYQPNQFAQSLRARQTHL
USA300_FPR3757 MKNISDIAKLAGVSKSTVSRFLNNGSVSKKTSEKLTRIIAEHDYQPNQFAQSLRARQTHL
************************************************************
COL IGAIIPRMNSYAVDETIKGLAKQCQKYESQLILNYTGLNIEAEIQALETLARSKVDGIVL
N315 IGAIIPRMNSYAVDETIKGLAKQCQKYESQLILNYTGLNIEAEIQALETLARSKVDGIVL
NCTC8325 IGAIIPRMNSYAVDETIKGLAKQCQKYESQLILNYTGLNIEAEIQALETLARSKVDGIVL
Newman IGAIIPRMNSYAVDETIKGLAKQCQKYESQLILNYTGLNIEAEIQALETLARSKVDGIVL
USA300_FPR3757 IGAIIPRMNSYAVDETIKGLAKQCQKYESQLILNYTGLNIEAEIQALETLARSKVDGIVL
************************************************************
COL MATDITERHIEVINKMNVPIVIVGQQHEQLHSIVHDDYKAGQIIGEWIGQQGYQQVEVFS
N315 MATDITERHIEVINKMNVPIVIVGQQHEQLHSIVHDDYKAGQIIGEWIGQQGYQQVEVFS
NCTC8325 MATDITERHIEVINKMNVPIVIVGQQHEQLHSIVHDDYKAGQIIGEWIGQQGYQQVEVFS
Newman MATDITERHIEVINKMNVPIVIVGQQHEQLHSIVHDDYKAGQIIGEWIGQQGYQQVEVFS
USA300_FPR3757 MATDITERHIEVINKMNVPIVIVGQQHEQLHSIVHDDYKAGQIIGEWIGQQGYQQVEVFS
************************************************************
COL VSEKDIAVGIHRKRGLLDQLAKYQIKPNIHETNFTYVEAQKDVANVLENVEQVDAVVGAT
N315 VSEKDIAVGIHRKRGLLDQLAKYQIKPNIHETNFTYVEAQKDVANVLENVEQVDAVVGAT
NCTC8325 VSEKDIAVGIHRKRGLLDQLAKYQIKPNIHETNFTYVEAQKDVANVLENVEQVDAVVGAT
Newman VSEKDIAVGIHRKRGLLDQLAKYQIKPNIHETNFTYVEAQKDVANVLENVEQVDAVVGAT
USA300_FPR3757 VSEKDIAVGIHRKRGLLDQLAKYQIKPNIHETNFTYVEAQKDVANVLENVEQVDAVVGAT
************************************************************
COL DTIALAAYKYYSDKKDVMKPHQIYGFGGDPMTQLVSPSIKTIHYNYFEAGQCAMEEIQQM
N315 DTIALAAYKYYSDKNDVMKPHQIYGFGGDPMTQLVSPSIKTIHYNYFEAGQCAMEEIQQM
NCTC8325 DTIALAAYKYYSDKKDVMKPHQIYGFGGDPMTQLVSPSIKTIHYNYFEAGQCAMEEIQQM
Newman DTIALAAYKYYSDKKDVMKPHQIYGFGGDPMTQLVSPSIKTIHYNYFEAGQCAMEEIQQM
USA300_FPR3757 DTIALAAYKYYSDKKDVMKPHQIYGFGGDPMTQLVSPSIKTIHYNYFEAGQCAMEEIQQM
**************:*********************************************
COL LKKQDMPYSVTVDVNI
N315 LKKQDMPYSVTVDVNI
NCTC8325 LKKQDMPYSVTVDVNI
Newman LKKQDMPYSVTVDVNI
USA300_FPR3757 LKKQDMPYSVTVDVNI
****************