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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005371000
- symbol?: yidC
- synonym:
- description?: protein translocase component YidC
- protein translocase component YidC
- 60Kd inner membrane protein insertase YidC
- lipoprotein
- membrane protein insertase YidC
- membrane protein oxaA
- membrane protein oxaA precursor
- 60 kDa inner membrane insertion protein
- 60 kDa inner membrane protein YIDC
- 60Kd inner membrane family protein
- Inner membrane protein translocase component YidC
- lipoprotein precursor
- membrane-embedded lipoprotein precursor
- OxaI/YidC membrane insertion protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5543450..5544058
- synteny block?: BlockID0041680
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2031 (oxaI)
08BA02176:
C248_2103
11819-97:
MS7_2106 (oxaA)
6850:
RSAU_001929 (yidC)
71193:
ST398NM01_2133
ECT-R 2:
ECTR2_1946
ED133:
SAOV_2131c
ED98:
SAAV_2144
HO 5096 0412:
SAEMRSA15_19990
JH1:
SaurJH1_2165
JH9:
SaurJH9_2127
JKD6008:
SAA6008_02128 (oxaI)
JKD6159:
SAA6159_02004 (oxaI)
LGA251:
SARLGA251_18920
M013:
M013TW_2048
MRSA252:
SAR2179
MSHR1132:
SAMSHR1132_19140
MSSA476:
SAS1994
Mu3:
SAHV_2075
Mu50:
SAV2090
MW2:
MW2013
RF122:
SAB1974c
ST398:
SAPIG2133
T0131:
SAT0131_02249 (cdr)
TCH60:
HMPREF0772_11102
TW20:
SATW20_22290
USA300_TCH1516:
USA300HOU_2087
VC40:
SAVC_09330
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKKALLPLFLGIMVFLAGCDYSKPEKRSGFFYNTFVDPMKNVLDWLGNNLLNDNYGLAI
N315 MKKKALLPLFLGIMVFLAGCDYSKPEKRSGFFYNTFVDPMKNVLDWLGNNLLNDNYGLAI
NCTC8325 MKKKALLPLFLGIMVFLAGCDYSKPEKRSGFFYNTFVDPMKNVLDWLGNNLLNDNYGLAI
Newman MKKKALLPLFLGIMVFLAGCDYSKPEKRSGFFYNTFVDPMKNVLDWLGNNLLNDNYGLAI
USA300_FPR3757 MKKKALLPLFLGIMVFLAGCDYSKPEKRSGFFYNTFVDPMKNVLDWLGNNLLNDNYGLAI
************************************************************
COL IILVLVIRIILLPFMLSNYKNSHMMRQKMKVAKPEVEKIQEKVKRARTQEEKMAANQELM
N315 IILVLVIRIILLPFMLSNYKNSHMMRQKMKVAKPEVEKIQEKVKRARTQEEKMAANQELM
NCTC8325 IILVLVIRIILLPFMLSNYKNSHMMRQKMKVAKPEVEKIQEKVKRARTQEEKMAANQELM
Newman IILVLVIRIILLPFMLSNYKNSHMMRQKMKVAKPEVEKIQEKVKRARTQEEKMAANQELM
USA300_FPR3757 IILVLVIRIILLPFMLSNYKNSHMMRQKMKVAKPEVEKIQEKVKRARTQEEKMAANQELM
************************************************************
COL QVYKKYDMNPIKSMLGCLPMLIQLPIIMGLYFVLKDQLVDGLFKYPHFLWFDLGRPDIWI
N315 QVYKKYDMNPIKSMLGCLPMLIQLPIIMGLYFVLKDQLVDGLFKYPHFLWFDLGRPDIWI
NCTC8325 QVYKKYDMNPIKSMLGCLPMLIQLPIIMGLYFVLKDQLVDGLFKYPHFLWFDLGRPDIWI
Newman QVYKKYDMNPIKSMLGCLPMLIQLPIIMGLYFVLKDQLVDGLFKYPHFLWFDLGRPDIWI
USA300_FPR3757 QVYKKYDMNPIKSMLGCLPMLIQLPIIMGLYFVLKDQLVDGLFKYPHFLWFDLGRPDIWI
************************************************************
COL TIIAGVLYFIQAYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFL
N315 TIIAGVLYFIQAYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFL
NCTC8325 TIIAGVLYFIQAYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFL
Newman TIIAGVLYFIQAYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFL
USA300_FPR3757 TIIAGVLYFIQAYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFL
************************************************************
COL VVQTHFANIYYEKVAKKEVQPFIEAYEREHNGGSNKKGKNTQVVSKKKKK
N315 VVQTHFANIYYEKVAKKEVQPFIEAYEREHNGGSNKKGKNTQVVSKKKKK
NCTC8325 VVQTHFANIYYEKVAKKEVQPFIEAYEREHNGGSNKKGKNTQVVSKKKKK
Newman VVQTHFANIYYEKVAKKEVQPFIEAYEREHNGGSNKKGKNTQVVSKKKKK
USA300_FPR3757 VVQTHFANIYYEKVAKKEVQPFIEAYEREHNGGSNKKGKNTQVVSKKKKK
**************************************************