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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005564000
- symbol?: —
- synonym:
- description?: membrane protein
- membrane protein
- transporter gate domain-containing protein
- transporter gate domain protein
- YjiH family protein
- membrane spanning protein
- nucleoside recognition domain-containing protein
- Nucleoside recognition domain protein
- nucleoside recognition family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5704637..5705830
- synteny block?: BlockID0043240
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2112
08BA02176:
C248_2211
11819-97:
MS7_2197
6850:
RSAU_002018
71193:
ST398NM01_2234
ECT-R 2:
ECTR2_2035
ED133:
SAOV_2221c
ED98:
SAAV_2235
HO 5096 0412:
SAEMRSA15_20790
JH1:
SaurJH1_2243
JH9:
SaurJH9_2205
JKD6008:
SAA6008_02212
JKD6159:
SAA6159_02085
LGA251:
SARLGA251_19690
M013:
M013TW_2140
MRSA252:
SAR2265
MSHR1132:
SAMSHR1132_20060
MSSA476:
SAS2075
Mu3:
SAHV_2158
Mu50:
SAV2174
MW2:
MW2100
RF122:
SAB2055c
ST398:
SAPIG2234
T0131:
SAT0131_02343
TCH60:
HMPREF0772_11018
TW20:
SATW20_23090
USA300_TCH1516:
USA300HOU_2166
VC40:
SAVC_09740
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MDSFSRKEIVIGRLKFITMSLIGILLFLVPIPVEQDGQKQTTLPVAFLAGVLKDVLGGVM
N315 MDSFSRKEIVIGRLKFITMSLIGILLFLVPIPVEQDGQKQTTLPVAFLAGVLKDVLGGVM
NCTC8325 -----------------------------------------------------------M
Newman MDSFSRKEIVIGRLKFITMSLIGILLFLVPIPVEQDGQKQTTLPVAFLAGVLKDVLGGVM
USA300_FPR3757 ------------------MSLIGILLFLVPIPVEQDGQKQTTLPVAFLAGVLKDVLGGVM
*
COL PFLIVTIITLSGIITLICSTILKDKLKPDGLMNNAFNVRIGWLILRILAVVFAWMTFLRI
N315 PFLIVTIITLSGIITLICSTILKDKLKPDGLMNNAFNVRIGWLILRILAVVFAWMTFLRI
NCTC8325 PFLIVTIITLSGIITLICSTILKDKLKPDGLMNNAFNVRIGWLILRILAVVFAWMTFLRI
Newman PFLIVTIITLSGIITLICSTILKDKLKPDGLMNNAFNVRIGWLILRILAVVFAWMTFLRI
USA300_FPR3757 PFLIVTIITLSGIITLICSTILKDKLKPDGLMNNAFNVRIGWLILRILAVVFAWMTFLRI
************************************************************
COL GSKVIYSDETGGLLFSSLLPTLVAVFLFAALFLPLLMEYGLLEMLGPIFRPVMRPLFTLP
N315 GSKVIYSDETGGLLFSSLLPTLVAVFLFAALFLPLLMEYGLLEMLGPIFRPVMRPLFTLP
NCTC8325 GSKVIYSDETGGLLFSSLLPTLVAVFLFAALFLPLLMEYGLLEMLGPIFRPVMRPLFTLP
Newman GSKVIYSDETGGLLFSSLLPTLVAVFLFAALFLPLLMEYGLLEMLGPIFRPVMRPLFTLP
USA300_FPR3757 GSKVIYSDETGGLLFSSLLPTLVAVFLFAALFLPLLMEYGLLEMLGPIFRPVMRPLFTLP
************************************************************
COL GRSTVDNLASFIGDGTVGVLITSRQYGEGYYSRREATVISTTFSVVSITFAIVVAETVHM
N315 GRSTVDNLASFIGDGTVGVLITSRQYGEGYYSRREATVISTTFSVVSITFAIVVAETVHM
NCTC8325 GRSTVDNLASFIGDGTVGVLITSRQYGEGYYSRREATVISTTFSVVSITFAIVVAETVHM
Newman GRSTVDNLASFIGDGTVGVLITSRQYGEGYYSRREATVISTTFSVVSITFAIVVAETVHM
USA300_FPR3757 GRSTVDNLASFIGDGTVGVLITSRQYGEGYYSRREATVISTTFSVVSITFAIVVAETVHM
************************************************************
COL QNQFFAFYLSVIVSCLVAAVIMPRIWPLNKIPDEYAKEVPESARTEALPEGKTALRHGFD
N315 QNQFFAFYLSVIVSCLVAAVIMPRIWPLNKIPDEYAKEVPESARTEALPEGKTALRHGFD
NCTC8325 QNQFFAFYLSVIVSCLVAAVIMPRIWPLNKIPDEYAKEVPESARTEALPEGKTALRHGFD
Newman QNQFFAFYLSVIVSCLVAAVIMPRIWPLNKIPDEYAKEVPESARTEALPEGKMALRHGFD
USA300_FPR3757 QNQFFAFYLSVIVSCLVAAVIMPRIWPLNKIPDEYAKEVPESARTEALPEGKTALRHGFD
**************************************************** *******
COL TATEVGIKAPGVIDFFKSGLKTVIDMWFVILPVVMSIGTIATIIANYTPFFVILGKPFVP
N315 TATEVGIKAPGVIDFFKSGLKTVIDMWFVILPVVMSIGTIATIIANYTPFFVILGKPFVP
NCTC8325 TATEVGIKAPGVIDFFKSGLKTVIDMWFVILPVVMSIGTIATIIANYTPFFVILGKPFVP
Newman TATEVGIKAPGVIDFFKSGLKTVIDMWFVILPVVMSIGTIATIIANYTPFFVILGKPFVP
USA300_FPR3757 TATEVGIKAPGVIDFFKSGLKTVIDMWFVILPVVMSIGTIATIIANYTPFFVILGKPFVP
************************************************************
COL FLELMQIPEAAQASQTIIIGFADMFLPSILIEGVQNDITRFVIGALSISQLIYLSEVGGV
N315 FLELMQIPEAAQASQTIIIGFADMFLPSILIEGVQNDITRFVIGALSISQLIYLSEVGGV
NCTC8325 FLELMQIPEAAQASQTIIIGFADMFLPSILIEGVQNDITRFVIGALSISQLIYLSEVGGV
Newman FLELMQIPEAAQASQTIIIGFADMFLPSILIEGVQNDITRFVIGALSISQLIYLSEVGGV
USA300_FPR3757 FLELMQIPEAAQASQTIIIGFADMFLPSILIEGVQNDITRFVIGALSISQLIYLSEVGGV
************************************************************
COL ILGSKIPVSIGKLFMIFLIRTIITLPIISLMAHLLL
N315 ILGSKIPVSIGKLFMIFLIRTIITLPIISLMAHLLL
NCTC8325 ILGSKIPVSIGKLFMIFLIRTIITLPIISLMAHLLL
Newman ILGSKIPVSIGKLFMIFLIRTIITLPIISLMAHLLL
USA300_FPR3757 ILGSKIPVSIGKLFMIFLIRTIITLPIISLMAHLLL
************************************