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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005671000
- symbol?: cbiO2
- synonym: ecfA2
- description?: cobalt transporter ATP-binding subunit
- cobalt transporter ATP-binding subunit
- energy-coupling factor transporter ATPase
- Cobalt import ATP-binding protein CbiO 1
- ATPase component of general energizing module of ECF transporters
- ABC superfamily ATP binding cassette transporter, ABC protein
- ABC transporter ATP-binding protein
- ABC transporter family protein
- ATP-binding ABC transporter
- energy-coupling factor transporter ATP-binding protein EcfA 1
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5793427..5794287
- synteny block?: BlockID0044180
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2159
08BA02176:
C248_2257
11819-97:
MS7_2241 (ecfA1)
6850:
RSAU_002057 (cbiO1)
71193:
ST398NM01_2274
ECT-R 2:
ECTR2_2083
ED133:
SAOV_2259c
ED98:
SAAV_2283 (cbiO)
HO 5096 0412:
SAEMRSA15_21200
JH1:
SaurJH1_2289 (cbiO)
JH9:
SaurJH9_2248 (cbiO)
JKD6008:
SAA6008_02258 (cbiO_1)
JKD6159:
SAA6159_02128 (cbiO_1)
LGA251:
SARLGA251_20070
M013:
M013TW_2181
MRSA252:
SAR2304 (cbiO)
MSHR1132:
SAMSHR1132_20470
MSSA476:
SAS2112 (cbiO)
Mu3:
SAHV_2205 (cbiO)
Mu50:
SAV2221 (cbiO)
MW2:
MW2140 (cbiO)
RF122:
SAB2094c (cbiO)
ST398:
SAPIG2274
T0131:
SAT0131_02394
TCH60:
HMPREF0772_10977
TW20:
SATW20_23550
USA300_TCH1516:
USA300HOU_2212 (cbiO)
VC40:
SAVC_09975 (cbiO)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTIRFDNVSYTYQKGTPYQHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT
N315 MTIRFDNVSYTYQKGTPYQHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT
NCTC8325 MTIRFDNVSYTYQKGTPYQHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT
Newman MTIRFDNVSYTYQKGTPYQHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT
USA300_FPR3757 MTIRFDNVSYTYQKGTPYQHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT
************************************************************
COL TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFEDTVEREMIFGPKNFKMNLDE
N315 TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFEDTVEREMIFGPKNFKMNLDE
NCTC8325 TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFEDTVEREMIFGPKNFKMNLDE
Newman TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFEDTVEREMIFGPKNFKMNLDE
USA300_FPR3757 TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFEDTVEREMIFGPKNFKMNLDE
************************************************************
COL AKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVVDEPTAGLDPQS
N315 AKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVVDEPTAGLDPQS
NCTC8325 AKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVVDEPTAGLDPQS
Newman AKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVVDEPTAGLDPQS
USA300_FPR3757 AKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVVDEPTAGLDPQS
************************************************************
COL KRQVMRLLKSLQTDENKAIILISHDMNEVARYADEVIVMKEGSIVSQTSPKELFKDKKKL
N315 KRQVMRLLKSLQTDENKAIILISHDMNEVARYADEVIVMKEGSIVSQTSPKELFKDKKKL
NCTC8325 KRQVMRLLKSLQTDENKAIILISHDMNEVARYADEVIVMKEGSIVSQTSPKELFKDKKKL
Newman KRQVMRLLKSLQTDENKAIILISHDMNEVARYADEVIVMKEGSIVSQTSPKELFKDKKKL
USA300_FPR3757 KRQVMRLLKSLQTDENKAIILISHDMNEVARYADEVIVMKEGSIVSQTSPKELFKDKKKL
************************************************************
COL ADWHIGLPEIVQLQYDFEQKYQTKLKDIALTEEAFVSLYKEWQHEK
N315 ADWHIGLPEIVQLQYDFEQKYQTKLKDIALTEEAFVSLYKEWQHEK
NCTC8325 ADWHIGLPEIVQLQYDFEQKYQTKLKDIALTEEAFVSLYKEWQHEK
Newman ADWHIGLPEIVQLQYDFEQKYQTKLKDIALTEEAFVSLYKEWQHEK
USA300_FPR3757 ADWHIGLPEIVQLQYDFEQKYQTKLKDIALTEEAFVSLYKEWQHEK
**********************************************