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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005672000
- symbol?: cbiO1
- synonym: ecfA1
- description?: cobalt transporter ATP-binding subunit
- cobalt transporter ATP-binding subunit
- energy-coupling factor transporter ATPase
- cobalt transporter ATP-binding subunit 2
- ATPase component of general energizing module of ECF transporters
- cobalt import ATP-binding protein CbiO 2
- ABC superfamily ATP binding cassette transporter, ABC protein
- ABC transporter ATP-binding protein
- ABC transporter family protein
- ATP-binding ABC transporter
- recF/RecN/SMC N terminal domain protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5794284..5795093
- synteny block?: BlockID0044190
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2160
08BA02176:
C248_2258
11819-97:
MS7_2242
6850:
RSAU_002058 (cbiO2)
71193:
ST398NM01_2275
ECT-R 2:
ECTR2_2084
ED133:
SAOV_2260c
ED98:
SAAV_2284
HO 5096 0412:
SAEMRSA15_21210
JH1:
SaurJH1_2290 (cbiO)
JH9:
SaurJH9_2249 (cbiO)
JKD6008:
SAA6008_02259 (cbiO)
JKD6159:
SAA6159_02129 (cbiO)
LGA251:
SARLGA251_20080
M013:
M013TW_2182
MRSA252:
SAR2305 (cbiO)
MSHR1132:
SAMSHR1132_20480
MSSA476:
SAS2113 (cbiO)
Mu3:
SAHV_2206 (cbiO)
Mu50:
SAV2222 (cbiO)
MW2:
MW2141 (cbiO)
RF122:
SAB2095c (cbiO)
ST398:
SAPIG2275
T0131:
SAT0131_02395
TCH60:
HMPREF0772_10976
TW20:
SATW20_23560
USA300_TCH1516:
USA300HOU_2213 (cbiO)
VC40:
SAVC_09980 (cbiO)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEDKNSVIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK
N315 MEDKNSVIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK
NCTC8325 MEDKNSVIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK
Newman MEDKNSVIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK
USA300_FPR3757 MEDKNSVIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK
************************************************************
COL VKSGEIFYNNQAITDDNFEKLRKDIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMH
N315 VKSGEIFYNNQAITDDNFEKLRKDIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPHDEMH
NCTC8325 VKSGEIFYNNQAITDDNFEKLRKDIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMH
Newman VKSGEIFYNNQAITDDNFEKLRKDIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMH
USA300_FPR3757 VKSGEIFYNNQAITDDNFEKLRKDIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMH
*******************************************************:****
COL RRVSEALKQVDMLERADYEPNALSGGQKQRVAIASVLALNPSVIILDEATSMLDPDARQN
N315 RRVSEALKQVDMLERADYEPNALSGGQKQRVAIASVLALNPSVIILDEATSMLDPDARQN
NCTC8325 RRVSEALKQVDMLERADYEPNALSGGQKQRVAIASVLALNPSVIILDEATSMLDPDARQN
Newman RRVSEALKQVDMLERADYEPNALSGGQKQRVAIASVLALNPSVIILDEATSMLDPDARQN
USA300_FPR3757 RRVSEALKQVDMLERADYEPNALSGGQKQRVAIASVLALNPSVIILDEATSMLDPDARQN
************************************************************
COL LLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTATEIFDNAEELTRIG
N315 LLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTATEIFDHAEELTRIG
NCTC8325 LLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTATEIFDNAEELTRIG
Newman LLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTATEIFDNAEELTRIG
USA300_FPR3757 LLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTATEIFDNAEELTRIG
***************************************************:********
COL LDLPFPIKINQMLGHQTSFLTYEGLVDQL
N315 LDLPFPIKINQMLGHQTSFLTYEGLVDQL
NCTC8325 LDLPFPIKINQMLGHQTSFLTYEGLVDQL
Newman LDLPFPIKINQMLGHQTSFLTYEGLVDQL
USA300_FPR3757 LDLPFPIKINQMLGHQTSFLTYEGLVDQL
*****************************