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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005723000
- symbol?: —
- description?: MFS transporter
- MFS transporter
- drug transporter
- putative drug transporter
- major facilitator superfamily drug transporter
- drug transporter, putative
- Major facilitator family transporter
- major facilitator superfamily protein
- major facilitator superfamily protein (MFS)
- major facilitator superfamily transporter
- major facilitator transporter
- membrane transporter
- MFS family major facilitator transporter
- MFS superfamily transporter
- permease of the major facilitator superfamily
- putative transporter protein
- transporter protein
- transporter ybfD
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5827908..5828951
- synteny block?: BlockID0044690
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2204
08BA02176:
C248_2303
11819-97:
MS7_2285
6850:
RSAU_002100
71193:
ST398NM01_2317
ECT-R 2:
ECTR2_2127
ED133:
SAOV_2304
ED98:
SAAV_2329
HO 5096 0412:
SAEMRSA15_21640
JH1:
SaurJH1_2333
JH9:
SaurJH9_2291
JKD6008:
SAA6008_02303
JKD6159:
SAA6159_02171
LGA251:
SARLGA251_20500
M013:
M013TW_2224
MRSA252:
SAR2350
MSHR1132:
SAMSHR1132_20910
MSSA476:
SAS2156
Mu3:
SAHV_2250
Mu50:
SAV2266
MW2:
MW2184
RF122:
SAB2138
ST398:
SAPIG2317
T0131:
SAT0131_02442
TCH60:
HMPREF0772_10934
TW20:
SATW20_23980
USA300_TCH1516:
USA300HOU_2247
VC40:
SAVC_10190
⊟Genome Viewer[edit | edit source]
| COL chromosome | |
| N315 chromosome | |
| NCTC8325 chromosome | |
| Newman chromosome | |
| USA300_FPR3757 chromosome |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTNQGSLNKSPIFTKSFTINFLVNFIVYLCMYLLLVVIAGYSKQAFDASDSLAGLVVGLF
N315 MTNQGSLNKSPIFTKSFTINFFVNFIVYLCMYLLLVVIAGYSKQAFDASDSLAGLVVGLF
NCTC8325 MTNQGSLNKSPIFTKSFTINFLVNFIVYLCMYLLLVVIAGYSKQAFDASDSLAGLVVGLF
Newman MTNQGSLNKSPIFTKSFTINFLVNFIVYLCMYLLLVVIAGYSKQAFDASDSLAGLVVGLF
USA300_FPR3757 MTNQGSLNKSPIFTKSFTINFLVNFIVYLCMYLLLVVIAGYSKQAFDASDSLAGLVVGLF
*********************:**************************************
COL IVGSLIGRFATGKFVNQIGPKRLLFIGLIALIITQLLYFIDGSLAFLIFVRLINGIATAV
N315 IVGSLIGRFATGKFVNQIGPKRLLFIGLIALIITQLLYFIDGSLAFLIFVRLINGIATAV
NCTC8325 IVGSLIGRFATGKFVNQIGPKRLLFIGLIALIITQLLYFIDGSLAFLIFVRLINGIATAV
Newman IVGSLIGRFATGKFVNQIGPKRLLFIGLIALIITQLLYFIDGSLAFLIFVRLINGIATAV
USA300_FPR3757 IVGSLIGRFATGKFVNQIGPKRLLFIGLIALIITQLLYFIDGSLAFLIFVRLINGIATAV
************************************************************
COL VTTATGTIAAYVTPVNRKSEGISLFSLSLVLGTAIGPFLGMLLITKYAIDLLFIICVILG
N315 VTTATGTIAAYVTPVNRKSEGISLFSLSLVLGTAIGPFLGMLLITKYAIDLLFIICVILG
NCTC8325 VTTATGTIAAYVTPVNRKSEGISLFSLSLVLGTAIGPFLGMLLITKYAIDLLFIICVILG
Newman VTTATGTIAAYVTPVNRKSEGISLFSLSLVLGTAIGPFLGMLLITKYAIDLLFIICVILG
USA300_FPR3757 VTTATGTIAAYVTPVNRKSEGISLFSLSLVLGTAIGPFLGMLLITKYAIDLLFIICVILG
************************************************************
COL ILGLIISLFIKVDFEVTNNKTETNVIDKPRFSIHQFIAKEAIPVAVIMLLIGVTYASILT
N315 ILGLIISLFIKVDFEVTNNKTETDVINKPRFSIHQFIAKEAIPVAVIMLLIGVTYASILT
NCTC8325 ILGLIISLFIKVDFEVTNNKTETNVIDKPRFSIHQFIAKEAIPVAVIMLLIGVTYASILT
Newman ILGLIISLFIKVDFEVTNNKTETNVIDKPRFSIHQFIAKEAIPVAVIMLLIGVTYASILT
USA300_FPR3757 ILGLIISLFIKVDFEVTNNKTETNVIDKPRFSIHQFIAKEAIPVAVIMLLIGVTYASILT
***********************:**:*********************************
COL YLQAFALERHLVTAASYFFICYAIASLITRPIAGRLMDDKNENIIVYPAFIMLFLSFVCL
N315 YLQAFALERHLVTAASYFFICYAIASLITRPIAGRLMDDKNENIIVYPAFIMLFLSFVCL
NCTC8325 YLQAFALERHLVTAASYFFICYAIASLITRPIAGRLMDDKNENIIVYPAFIMLFLSFVCL
Newman YLQAFALERHLVTAASYFFICYAIASLITRPIAGRLMDDKNENIIVYPAFIMLFLSFVCL
USA300_FPR3757 YLQAFALERHLVTAASYFFICYAIASLITRPIAGRLMDDKNENIIVYPAFIMLFLSFVCL
************************************************************
COL ISSYQSWLILLAGACLGLGYGNLSSAMQSIAIKVSPPIKYGIATSTFYVGLDAGVGFGPS
N315 ISSYQSWLILLAGACLGLGYGNLSSAMQSIAIKVSPPIKYGIATSTFYVGLDAGVGFGPS
NCTC8325 ISSYQSWLILLAGACLGLGYGNLSSAMQSIAIKVSPPIKYGIATSTFYVGLDAGVGFGPS
Newman ISSYQSWLILLAGACLGLGYGNLSSAMQSIAIKVSPPIKYGIATSTFYVGLDAGVGFGPS
USA300_FPR3757 ISSYQSWLILLAGACLGLGYGNLSSAMQSIAIKVSPPIKYGIATSTFYVGLDAGVGFGPS
************************************************************
COL FLGLFTHMFSYSEIFGFMAALAIITMLVYFLIHGRHVTRNAMN
N315 FLGLFTHMFSYSEIFGFMAALAIITMLVYFLIHGRHVTRNAMN
NCTC8325 FLGLFTHMFSYSEIFGFMAALAIITMLVYFLIHGRHVTRNAMN
Newman FLGLFTHMFSYSEIFGFMAALAIITMLVYFLIHGRHVTRNAMN
USA300_FPR3757 FLGLFTHMFSYSEIFGFMAALAIITMLVYFLIHGRHVTRNAMN
*******************************************