From AureoWiki
Jump to navigation Jump to search

Summary[edit | edit source]

  • pan ID?: SAUPAN005798000
  • symbol?:
  • synonym:
  • description?: membrane protein
  • strand?: +
  • coordinates?: 5885747..5885932
  • synteny block?: BlockID0045430
  • occurrence?: in 91% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_2257
    08BA02176:
    C248_2360
    11819-97:
    MS7_2335
    6850:
    RSAU_002155
    71193:
    ST398NM01_2369
    ECT-R 2:
    ECTR2_2177
    ED133:
    SAOV_2358
    ED98:
    SAAV_2380
    HO 5096 0412:
    SAEMRSA15_22160
    JH1:
    SaurJH1_2385
    JH9:
    SaurJH9_2342
    JKD6008:
    SAA6008_02354
    JKD6159:
    SAA6159_02222
    LGA251:
    SARLGA251_21010
    M013:
    M013TW_2275
    MRSA252:
    SAR2402
    MSHR1132:
    SAMSHR1132_21430
    MSSA476:
    SAS2211
    Mu3:
    SAHV_2302
    Mu50:
    SAV2318
    MW2:
    MW2239
    RF122:
    SAB2195
    ST398:
    SAPIG2369
    T0131:
    SAT0131_02500
    TCH60:
    HMPREF0772_10877
    TW20:
    SATW20_24500
    USA300_TCH1516:
    VC40:
    SAVC_10455

Genome Viewer[edit | edit source]

COL
N315
NCTC8325

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MTTALIGVIVLILLIISFVPNYRAMKSAKEQGSNATRATIMVGIDIILIVLIIVTLLLKY
    N315            MTTALIGVIVLILLIISFVPNYRAMKSAKEQGSNATRATIMVGIDIILIVLIIVTLLLKY
    NCTC8325        MTTALIGVIVLILLIISFVPNYRAMKSAKEQGSNATRATIMVGIDIILIVLIIVTLLLKY
                    ************************************************************

    COL             M
    N315            M
    NCTC8325        M
                    *